Amaranthus tricolor (tampala): 130811176
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Entry
130811176 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130811176
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130811176
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130811176
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
SpaA
Chromo_MORC2_6th
SdrD_B
Motif
Other DBs
NCBI-GeneID:
130811176
NCBI-ProteinID:
XP_057533350
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Position
4:23731642..23748507
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AA seq
704 aa
AA seq
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MQGAWIGLQLFVLILINLMQNCIYSYMLTNNFTSPFYIQFTNRNARIEQKKHRISSEEVD
DPSPGPGSGPGVQLLYQENYIVLDNGIIKVKFSKPEGSVTKIEYNGIANLLEELNEESNR
GYWDVVWKGEGVTRKKGNLDRLHCTDFKVIVETDDQVEVSFTRTWNSSLTTKFPPLNIDK
RFIMLRGSSGFYTYVIYERPKDWPGFTLTNTRLAIKLNKVWFNYMAMADDRQRQLPLLDD
RSPERSQTLAYPEAVLLTNPIEAEFKGEVDDKYQYSGEAKDIQVHGWICSNPPTGLWHII
PNNEFRSAGPTKQYLTSHVGPTSLSVLLSTHYSGQELVAKFEDGEPWKKVLGPLFVYANS
MSQTDAGDWHQLWDDAKKQLAVEAKQWPYSFAVSDDFPSSEQRGSVNGKLLVHDRYMKTN
TSAAKAYVGVAAPGEVGSWQRESKGYQFWTTTDDEGNFTITNIRPGNYNLYAWVPGFIGD
YRNNDTLNITAGISIDMGDLVYEHPRDGPILWEIGVPDRSAAEFFIPDPNPKLINKLYLT
RYKFRQYGLWEKYTELYPDQDLVYTVNVSNYQKDWFFAQVNRNVNNTYQGTTWKIKFQLD
KIYPNGTYYLRLGLASATSSELQVRINDPQEKPPLFSSGLIGYDNTIARHGIHGLYWLYN
VSIPGDKFMLGNNTIFLTQVWGLSPWRGILYDYIRLESPVVDTN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggagcttggattggcctccaattgtttgtactgattttgattaatctcatgcaa
aattgcatatactcttatatgcttactaataattttacctcacccttttacatacaattt
acaaacaggaatgcaagaattgaacaaaaaaaacatagaataagttcagaggaagttgat
gatccatcgccaggcccaggttcaggcccaggggtgcagctgctctaccaagaaaactat
atagtgttggacaatggcataataaaagtgaaattctcaaaaccagaaggaagtgtgaca
aaaatagagtacaatggcattgctaatttgcttgaagaactcaatgaagaatccaataga
gggtattgggatgttgtatggaaaggagagggagttaccagaaaaaagggaaaccttgac
aggcttcattgtacagattttaaagttatagtggaaacagatgaccaagtggaagtctca
tttacaaggacatggaactcatctcttactacaaaatttcctcctttgaacattgacaaa
aggttcattatgctacggggttcttctggcttctatacgtatgttatctatgaacgccca
aaagattggcctggtttcactctcacaaatactcggcttgcaatcaagctcaataaagta
tggtttaactacatggcgatggcagatgaccggcaaaggcaattgcctctcttagatgat
cgttcaccggagagaagccaaaccttagcttaccctgaagctgttttactcaccaatccc
attgaggcagagtttaaaggagaggttgatgacaaataccaatactcgggtgaagcgaaa
gacatccaagttcatgggtggatatgcagcaatccacccactggactctggcatatcatc
cctaataacgagtttcgatctgctggacccaccaaacaatacttgacatcacacgttggc
ccgacttccctctcagtactactaagtactcactactcgggccaggaacttgttgcgaaa
tttgaagatggcgagccatggaaaaaagttcttggcccgctttttgtgtatgctaattct
atgtcacagacagacgcgggtgactggcaccaactctgggacgatgcaaaaaaacagttg
gctgttgaagcaaaacagtggccttatagctttgcagtttcagacgattttccatcatct
gaacagcgcggtagtgttaatggtaaattactcgtccatgacaggtatatgaaaactaat
acctcagcggctaaagcatatgtgggggttgcggctccaggggaagtcggatcatggcaa
agggaaagcaagggatatcaattctggactacaacagatgacgagggtaatttcaccatt
acaaatatacgtcctggaaactataatctctacgcgtgggtgcctggtttcattggcgat
tatagaaacaacgacacactcaatataacagcaggaatttctattgatatgggtgacctt
gtatatgaacatccaagagatggacctatattgtgggagatcggtgttccagatcgctct
gcagctgaattcttcattcctgatcccaatccaaagcttattaataagctatatcttacc
cgttacaagtttcgacaatatggtttatgggaaaagtacactgagttgtatcctgatcaa
gatttagtttatactgttaatgttagcaactatcaaaaggattggttcttcgcccaagtt
aacagaaatgttaacaacacgtatcaaggaactacatggaagatcaaattccaacttgac
aaaatctaccctaatggaacttattacttgagattgggactagcatcagcaactagttcc
gagttacaggttaggattaatgatccacaagaaaaacctcccttattttcgagtggacta
atagggtacgataatacgattgctaggcatggaattcatgggctgtattggctttacaat
gtgagcataccaggagacaaatttatgttgggaaataataccattttcttgacacaagtt
tggggtcttagcccttggagaggcatattatacgactacattcgtcttgaaagtcctgtt
gttgataccaactga
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