Amaranthus tricolor (tampala): 130811194
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Entry
130811194 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130811194 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130811194
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130811194
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
SdrD_B
SpaA
Motif
Other DBs
NCBI-GeneID:
130811194
NCBI-ProteinID:
XP_057533370
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Position
4:23683437..23696641
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AA seq
642 aa
AA seq
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MQIKLPTYDMILSWCLQVVIGNGVLEITISNPDGIVTKIKFNGIENLLEETNEEDNRGYW
DLNWSDAGSTGTTGYYDRIKGTSFQVIVEDEDMVEVSITRTWNPTSQTKLVPLNIDKRFV
VLRESSGFYSYAIYEKLMEWPGFNLPQTRIVFKLNKKWFEYMVVADDRQRRMPLPEDRLP
ERCQILDIPEAVLLTNPIEDEFKEEVDDKYQYSCENKDLQVHGWICTDPPTGFWQITPSD
EFRTGGPLKQNLTSHVGPTNLAMFISAHYAGEDMVAKFKQGEAWKRVFGPVFMYFNCGPK
ELDWHWLWDDAKNQMLIETENWPYSFPASQDYPTSDQRGNVSGRLLVYDRYSNDDVIPAN
GAYIGLASPNESKSWQLESKGYQFWTTTDEDGYYSISDIRPGDYNLYAWVPGFIGDYTFH
DNISVTAAGCDIDMGQLVYEAPSDGPTLWEIGIPDRTARQFFIPDPNPKYVNRLYLNHPD
RFRQYGLWERYADLYPNEDLIYTIGTSDYEKDWFFAQVTRKKGNTYQGTTWQIKFELQDV
NVNGLYKLRLALATANLAELQVRVKNPKSETPLFTTGLIGKDNAIARHGIHGLYRLYTAD
IHGTELKQGDNTIYLTQANGGSPFVGIMYDYIRLEGPTDSDP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaattacccacatatgatatgatcttaagttggtgcttgcaggttgtgatt
ggtaatggtgtacttgaaatcacgatatcaaatccagatggaatcgtcacaaagataaag
ttcaatggtatagaaaatttgcttgaagaaacaaatgaagaagataacagaggatattgg
gaccttaactggagtgatgcaggatcaactgggacaacaggatattatgataggatcaaa
ggaacaagttttcaagtaatagtagaggatgaagatatggtggaggtttccatcacaaga
acatggaaccccacttctcaaactaagcttgtgcctttaaacattgacaaaaggtttgta
gtgctccgcgaatcatcaggattctactcctatgcaatttatgagaagttaatggaatgg
ccgggattcaatctccctcaaacaaggattgttttcaagcttaataaaaagtggtttgag
tatatggttgtagcagatgacagacaaagaagaatgccacttcctgaggatcggttgcca
gaaagatgccaaatcctagatatccctgaagcagtgcttcttactaacccaattgaagat
gaattcaaagaagaggtggatgacaaataccaatattcatgtgagaacaaggatcttcaa
gtgcacggatggatatgcacagatcccccaactggattctggcaaataacaccaagtgat
gagtttcgaactggtggacccctcaagcaaaatcttacttctcatgttggccctactaat
cttgcgatgttcataagtgctcattatgctggggaggacatggtggctaaatttaaacaa
ggcgaggcatggaaaagggtgtttggtcctgtttttatgtattttaactgtggccctaag
gaacttgattggcactggctctgggacgatgcaaaaaaccagatgttgattgaaacagaa
aattggccttactcttttccagcttcccaggattatccaacatctgaccagaggggcaat
gtctctggtagattactagtctatgataggtattctaacgatgatgttattccagcaaat
ggagcatatataggtttagcttctccaaacgaatctaaatcttggcaactcgaaagcaag
ggttaccagttttggacaacaacagatgaggatggctattactcgataagtgatataaga
cctggtgactacaacctttatgcttgggttcctggtttcataggcgattacacattccac
gacaacatttctgtaactgcagcaggatgtgatattgatatggggcagctagtatatgaa
gctccaagtgatggaccaacattatgggaaattggtattcctgatcgaactgctagacaa
tttttcatccctgatcccaaccctaagtatgtcaacagactctaccttaatcatcctgac
agattcagacaatatggtttatgggaaagatatgccgatttatatcctaatgaagatcta
atctatacaattggcacaagtgattacgaaaaagattggttttttgctcaagttacaagg
aagaaaggcaatacttatcaaggaactacatggcaaattaagtttgaactccaagatgtg
aacgtgaatggactttataaactaagattagcacttgcaactgcaaatctggctgaatta
caggttcgagtaaagaatccaaaatcagagactccattatttacgactggactaataggg
aaagataatgcgattgcaaggcatgggattcatggactttacaggctttatacagcagat
atacatggaactgaacttaaacaaggtgataatacgatctacttaactcaagctaatggt
ggaagtccttttgttgggatcatgtatgactacattcgcctcgaaggccccacagattct
gatccatga
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