KEGG   Amaranthus tricolor (tampala): 130811346
Entry
130811346         CDS       T09367                                 
Name
(RefSeq) uncharacterized protein LOC130811346 isoform X1
  KO
K20476  RAB6A-GEF complex partner protein 1
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130811346
Membrane trafficking [BR:atri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab associated proteins
    130811346
SSDB
Motif
Pfam: RIC1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 130811346
NCBI-ProteinID: XP_057533599
LinkDB
Position
4:763375..778911
AA seq 1115 aa
MYMAYGWPHVMPIESGLCPSSQRIVYLKVINGLFLVVTPTHLELWSSSQHKVRLGNYKRD
SSSIQREGENIQGVWSPDAKLIAILTSSFYLHIFKVQFTDRRIHIGGKQPSALFLANVNL
VLNEQVPFSVKDLAVSNIVCDSKHLLMGLSNGSLYTISWKGEFCGASFIDLHLGESNEII
EGSYSFQNGNSAGRSLEVNDMGPTISGLASIVRLEFSLLLRMLIVLFGDGKLVVCSSSKR
GLKQAESIKAEKILGSGDAVCASVASDQQILAVGTKRGVVELYDLAGSVSLIRSVSLYDW
GYSAVDTGPVSCIAWTPDNAAFAVGWKLRGLTVWSVSGCRLMSTIRQVGLSSVSSPVAKP
NPDWKFEPLMAGTAAIHWDEYGYKLYAVEEKSSERILAFSFGKCCLNRGVSGSTYVRQVI
YGEDRLLLVQSEETDELKMLHLNLPVSYISQNWPVLHVAANIDGTFLAVAGLHGLILYDI
RLKKWRFFGDITQEQKIECKGLLWLGKIVVVCNYVKSSDTYELLFYPRYHLDQSSLLCKK
PLLTKPIVIDVYQDYILVAYRPFDIHILHVKLSGELTPTSNPDLQLSTVRELSIMTAKSP
PASMRFIPDHFKGYTSINHKSSQEPVRCLILRANGDMSLLDMDDGHELELTDSVELFWVT
CGKSDDNENLIEEISWLDYGHRGMQVWYPSPGADPFKQEDFLQLDPDLEFDREIYPMGLL
PNAGVVVGVCQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKIEQALKLAQLSAEK
PHFSHCLEWLLFTVFEAEISRQSMNKNQKVVSNHKSIKSLLEKTCDLIRNFPEYHNVVVS
VARKTDGRHWAELFSAAGRSTELFEECFQRRWYQTAACYILVIAKLEGVAVSQYCALRLL
QATLDDSLYELAGELVRFLLRSGREYEQAPTESDGVSPRFLGYFLFSSKKQAVDSKSSNK
EHTAHIASVKNILESHASYLMSGKELSKLVAFVKGTQFDVVDFLQRERYGCAHLENFASG
LELIGQKLHMGTLQSRLDAEFLLAQMCSVKFKEWIVVLATLLRRSEVLFDLFRHDARLWK
AYCYTLQSHPPFVEYHDLLKDLEQRLASLPNFQEI
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgtatatggcgtatggatggccgcatgttatgccaattgaatcaggactttgtccttct
tctcaacggatcgtatatcttaaagttattaatggattatttcttgttgttactcctact
catttggagctttggagttcttctcagcataaggtgaggctagggaactataaaagggat
tccagctcaatccagagagaaggtgagaatatacagggcgtgtggagtccagatgcaaaa
ttgattgctattcttacatcttccttctaccttcacatatttaaggttcaattcactgat
agaagaatacacattggaggaaagcagccatcagcactgtttcttgcaaatgttaatctt
gttctgaatgagcaggtccctttttctgtcaaggatttagcagtgagcaatattgtatgt
gatagtaagcatttactgatgggactctcgaatggatccttgtatactatatcatggaaa
ggggagttctgtggtgcttctttcattgacttacatttgggtgagagtaacgagataatt
gaagggtcatattcttttcaaaatggtaacagtgcaggaagaagtctagaagtaaatgat
atgggtccaactatatctgggcttgcctcaattgtaaggttggagttttcattattactg
aggatgctaatagtccttttcggtgatgggaaacttgtagtgtgctcttcgagcaagagg
ggccttaagcaagctgagtctatcaaagccgaaaagattttgggttcaggtgatgctgtg
tgtgcttctgtggcttctgatcaacaaattcttgcagtgggtactaaaagaggggttgtt
gagttgtatgatcttgctggatcagtctctttaatacgtagtgtttccttgtatgattgg
gggtattctgctgtggatactggtcctgtcagttgtatcgcatggacacctgataatgct
gcctttgccgttggttggaaactaagaggacttactgtttggtctgtgtcaggatgtcgt
ttaatgtctactatccgtcaagttggtttgagctctgtctcttcccctgtggctaagcca
aacccagactggaagtttgaacccttaatggcgggaactgcagcaatacactgggatgaa
tatggatacaagctgtacgcagtggaggaaaaatcttcagagagaattctggcattctca
tttggtaaatgttgccttaacagaggagtttcaggctcaacatatgttcgccaagtaatt
tatggtgaagaccgtttgctgcttgtgcagtcagaggagacagatgagcttaaaatgttg
caccttaatcttccagtctcttatatctcacagaactggccagttctacatgtagcagct
aacatagatggaacatttttggcagttgctggtcttcatgggctgatactttatgacata
cgtttgaaaaaatggcgcttctttggagatattacacaagaacagaagattgagtgcaag
ggtttgttgtggttggggaaaattgttgttgtctgcaattatgttaaatcatcagatacg
tatgagttactgttttatcctagatatcatcttgatcaaagctcattattgtgcaaaaaa
ccattgttgacaaagccaatagtcattgatgtttatcaggattatatacttgtggcctac
cgtccatttgacatccacatattgcacgtaaaattatctggtgaactaacaccgacaagt
aatcctgatttacagctttctacagtacgagagctttcaatcatgaccgcaaaaagccct
ccagcatctatgcggttcataccagatcattttaagggttacacttccataaaccacaag
tcatctcaagaacctgtgagatgtttgatattgcgtgcaaatggggatatgtcccttcta
gatatggatgatgggcatgaactggaacttacagattctgttgaattattttgggttaca
tgtggcaaatcagatgacaatgaaaatctcattgaagaaatttcttggttggattatggt
catcgaggaatgcaggtctggtatccatctccaggtgctgaccctttcaagcaggaagac
tttttgcagttggatcctgatttggaatttgatcgtgaaatatatcctatgggactgctt
ccaaatgctggcgtggtagttggcgtttgccagagaatgtcgttttctgcttgtacagag
tttccatgttttgaaccatctcctcaggcacaaactatattacattgtttgcttcgtcat
cttcttcagagagacaagattgagcaagctttaaaattagcacaattatcagcagaaaag
ccccatttttcccattgccttgagtggctcctttttactgtatttgaagctgaaatttca
aggcaaagcatgaataaaaatcagaaggttgtttccaatcacaagtctattaaatctctc
ctggagaagacgtgtgacttgattcggaattttcctgaatatcacaatgttgttgtgagt
gttgctaggaaaacagatggtcgacattgggcagagttgttttctgcagctggtagatca
acagagttgtttgaggagtgtttccagagaagatggtaccagacagcagcttgctatata
ctcgttatcgctaaacttgaaggcgttgcagtcagccagtactgtgctttgcgcttgtta
caggcaactcttgatgattctttgtatgaactcgcaggagaactggtgaggtttttgctc
agatctggaagagagtatgagcaggcacctacagagtctgatggagtttctcctagattt
ttgggttattttcttttctcttcaaagaagcaagcagttgattccaagagctcaaataaa
gagcatactgctcatattgcttctgttaaaaatattttggaaagccatgctagctatctg
atgtccgggaaggagttgtcaaagcttgttgcgtttgtcaagggcactcaatttgatgtg
gtggacttccttcaacgagaaagatatggctgtgcccatttagaaaatttcgcttcaggt
cttgaactgattgggcaaaagctccatatgggtacacttcagagtcgcttggacgcagaa
tttcttttggctcagatgtgctctgtcaaatttaaagagtggatagttgtcctcgccaca
ttgttaagaagatctgaggtattatttgatttatttcggcatgatgcacgtttatggaaa
gcgtattgctacactcttcagtcacatccaccttttgtcgagtatcatgatttgctcaaa
gacttagaacaaaggcttgcatcgcttccaaattttcaggagatataa

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