Amaranthus tricolor (tampala): 130811535
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Entry
130811535 CDS
T09367
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130811535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130811535
03032 DNA replication proteins [BR:
atri03032
]
130811535
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
130811535
Prokaryotic type
130811535
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
130811535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
Motif
Other DBs
NCBI-GeneID:
130811535
NCBI-ProteinID:
XP_057533847
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All DBs
Position
1:complement(5143226..5145898)
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AA seq
577 aa
AA seq
DB search
MADVEIPRSEKKKKKSSTKTTDSEPQAETDTTEFFIKPQSVTPKTDSSQWPILLKNYDRL
NVRTAHFTPIPAGYSPLTRPIVEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSG
TLDPKVTGNLIVCIERATRLVKSQQGAGKEYVCIARLHSAVPDVAKVSRALETLTGSCFQ
RPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLLLGVGGH
MQELRRVRSGILGEKDNMVTMHDVMDAQWMYDNFRDESYLRRVIMPLEVVLTSYKRLVVK
DTTVNAICYGAKLMIPGLLRFENDIDVGNEVVLMTTKGEAIALGIAEMTTAVMATCDHGV
VAKIKRVIMDRDTYPRKWGLGPRASMKKKLIASGMLDKHGKPNEKTPAEWMRNVPIVSDA
MIAGIAASAEPVTSVEVVEEKKEKKHKRKLEEVDASPATDGVKKLKVKEEEVVEVKEKVK
VKGEEVEVEKSEKKEKKKKKKEAEEAASPDVEKSKSKKDKKKKEKAESLDEEKSEKKKKK
KSKDVENGLADAEEEHRSEKKEKKDKKKKKDKDAAEE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgaaattcctcgttccgagaagaagaagaagaagagttccaccaaaacg
acggattccgaaccccaagccgaaactgatactacggaattctttatcaaaccccaatct
gtcaccccaaaaaccgattcttcacagtggccaatcctcctaaaaaactacgatcgtctc
aatgtaagaacagctcatttcacaccaattccagcaggttattctccattaactcgtcct
attgttgaatacataaggtatggaattcttaatttagataaacctgcaaatccatcttct
catgaagttgttgcttggattaaaaggattttaagggttgaaaaaacgggtcattcaggt
acgttagacccaaaagttactggaaatttaattgtttgtattgaaagagcaactcgttta
gttaaatctcaacaaggtgctggaaaggagtatgtttgcattgctagattacattctgct
gttcctgacgttgctaaagtttctagagcattagaaactttaactgggtcttgttttcaa
agaccaccgttgatatctgctgttaaaagacaacttagaataaggacaatttatgaaagt
aagttgcttgaatacgatgctgataaacatttggttgttttttggattagttgtgaggcg
ggtacttatgttaggacattatgtgttcatttagggttgttgttgggtgttggtggacat
atgcaagagcttaggagagtgaggtctgggatattaggtgagaaggataatatggtgaca
atgcatgatgtgatggatgctcaatggatgtatgataattttagggatgagagttatttg
aggcgagttattatgcctttagaggttgttttgactagttataagaggcttgttgtgaag
gatacaactgtgaatgcgatctgttatggtgcgaagttgatgattccagggttgcttaga
tttgagaatgatattgatgtaggtaatgaggttgttttgatgactactaaaggggaggcg
attgcgttggggattgcggagatgactacggctgttatggctacttgtgatcacggggtg
gttgcgaagattaagagggtgataatggatagagatacttatccaaggaaatgggggctt
gggccaagggcttcgatgaagaagaagttgattgcttcagggatgttggataagcatgga
aaaccaaatgagaagactccggctgaatggatgagaaatgttccgattgtttctgatgct
atgattgctggtattgctgcttcagctgagcctgtgacaagtgtggaagtggtggaggag
aagaaggagaagaaacataaaaggaaattggaggaagttgatgctagccctgccaccgat
ggtgtgaagaagttgaaagttaaagaggaggaagttgtggaggtgaaagaaaaagtgaag
gtgaagggcgaagaggttgaagttgagaaatccgagaagaaagagaagaaaaagaagaag
aaagaagcagaagaagctgcttctcctgatgtagagaaatcaaagtccaagaaggataag
aaaaagaaggagaaagccgagtctttagatgaggagaagtccgagaagaagaaaaagaag
aagagcaaggatgttgaaaatggtcttgcagatgctgaggaggaacaccgaagtgaaaag
aaggagaagaaggataagaagaaaaagaaggataaagatgctgccgaagaataa
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