Amaranthus tricolor (tampala): 130812536
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Entry
130812536 CDS
T09367
Name
(RefSeq) LEC14B protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130812536
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130812536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Cytochrom_D1
WDR54
WD40_like
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
130812536
NCBI-ProteinID:
XP_057534024
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All DBs
Position
5:complement(27551930..27566090)
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AA seq
466 aa
AA seq
DB search
MHFTLAEAIWREMGHYVNQLEIDSDESDTNDGYDQGNDECFACLDNDITHSTQVKSKPNE
HLSKIAPGKRKKSVSTLMMLAGREANYSGRGRFTSADRCHVSSRYLPVKGPWLVDQMNSR
AYVSQFSTDGSLFVTGFQGSHIRIYNIDKGWKLQKNIMAKSLRWTITDTSLSPNQQKLVY
SSMSPLVHIVDIGSAAIESLANVTEIHDGLDFSEYGEADSFGIFSLKFSTDGRELVAGSS
DDAIYVYDLEANKLTLRISAHMSDVNTVCFADESGHLIFSGSDDNLCKVWDRRCFVARGK
PAGIMVGHLQGITFIDSRGDGRYFISNGKDQCIKLWDVRKMSSNVTCDFDSRIEWDYRWM
DYPQQARNMRHPSDQSVATYKGHSVLRTLIRCYFSPELSSGQKYIYTGSNDGSVFIYDVV
SGTIIARLDHHKSAVRDCSWHPNYPILVSSSWDGTLVKWEFPGSVE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcattttacactggctgaggcaatttggagggaaatgggtcattatgtaaatcaatta
gagattgattctgatgaatcagataccaatgatggctatgatcaaggaaatgatgagtgt
tttgcttgtttggacaacgacattacccattcgactcaagttaaatcgaaacccaatgaa
catttgagtaagattgctcctgggaagagaaagaaatctgtatcaacattaatgatgttg
gctggtcgagaggcgaattattctgggagagggaggtttacatctgctgatcgttgccat
gtatctagccggtatctgcctgttaaaggaccttggcttgttgatcagatgaatagccga
gcatatgtttcacaattttctacagatgggtctctttttgttactggatttcagggaagt
cacattagaatatacaatattgataagggatggaagttacaaaagaacattatggctaaa
agcttgcgttggactattaccgacacatccctttcaccaaatcagcagaagcttgtgtac
tccagcatgtcacctcttgtacatattgtggatattggttctgctgctattgagtctctt
gcgaatgtcactgaaattcatgatggcttggatttctcggaatatggtgaagctgactct
tttggtattttctctctcaaattttcaacagatggccgagaacttgtggctggtagtagt
gatgatgctatctatgtttatgatcttgaagctaataagcttaccctcagaatatcagct
catatgtcggatgtgaacactgtttgttttgctgatgaaagtggccatctcatattttct
ggaagtgacgacaatctttgcaaggtgtgggacagacgatgctttgtagccagagggaaa
cctgcaggcatcatggtaggacatcttcaaggaataacatttatcgacagccgaggagat
ggtcgctatttcatttcaaatggtaaagaccagtgtataaagttgtgggatgtgaggaag
atgtcttctaatgttacttgtgattttgattctaggattgaatgggattaccgatggatg
gactatcctcagcaggcaagaaatatgagacatccatccgatcaatcagttgccacatat
aaaggacactcagtcttgcgtacattgatccgttgctatttttctccggaactaagttct
gggcagaaatacatctacaccggatccaatgatggcagtgtgtttatatatgacgtggta
agtggaactataatagcaaggcttgatcaccacaagtctgcagtgcgagactgcagttgg
caccctaattacccgatactcgttagctcatcttgggatggaactcttgtgaaatgggag
tttccgggtagtgtcgaataa
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integrated database retrieval system