Amaranthus tricolor (tampala): 130812539
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Entry
130812539 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130812539
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130812539
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130812539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130812539
NCBI-ProteinID:
XP_057534031
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All DBs
Position
5:complement(10541576..10552558)
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AA seq
385 aa
AA seq
DB search
MEAASMEERKKLEESKLTSAAAFVEGGIQDACDDACSICLEEFCDSDPSTVTGCKHEFHL
QCILEWCQRSSQCPMCWQPIILKDPTSQELLDGVVQERNASHNQPRNAAIFHHPALGNFE
IQHLPVGVNDAELEERIIQHLAAAAAMGRSRHFSRREGHRGRSSAQARPNFLVFSAHPNA
QDGAVSLSEGEQAESPASSIDTSSLLRIGREVSPRISVPNYSAHADTLSASGTSAFSAGH
ASPSNSGRSPNQSSPRCQDRAGPSNLQSFSEALKSRLNAMSTRYKESISKSTRGWKERWF
SRNSPMSDIGSDVRREVNVGIDTVSRMMEHMQTRDNGRPSGDTEPDVSEISQAREPVTQH
GVDGVVLSGDDNRTQAPCAAHSGSD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcaagtatggaggaacgcaagaaattggaggaatcgaaattaacttcggcg
gctgcttttgtggaaggtggcattcaggatgcgtgtgatgatgcttgcagtatctgcctt
gaggagttttgtgatagcgatccttccacggtgacagggtgtaagcacgagtttcatctt
cagtgtattctcgaatggtgccaaaggagttctcagtgcccaatgtgttggcagcctatt
attttgaaggacccaacaagccaagaactcttggatggtgtagtacaagagagaaatgcc
agtcataaccaaccgagaaatgctgccatatttcaccatccagcattgggaaattttgag
atacaacatttgccagttggtgtaaatgatgctgagctggaggagcgcataattcagcac
ttagctgctgctgctgcaatgggccgatcacgccatttttctagaagagaaggccacagg
ggcagatcatcagctcaagctcgtcctaattttctggttttttctgctcatcctaatgca
caagatggtgctgtctctctttctgaaggagagcaagctgaatctccagccagctcaatc
gatacatcttccttgcttagaattgggagagaagtatccccccgtatatctgtaccaaat
tattcagctcatgctgatacactttctgcctctggaactagtgcctttagtgctggacat
gcttctccatccaacagtgggaggtctccaaatcaatcttctcccagatgtcaagataga
gcaggtccatctaatctccagtcattttcagaagctttgaaatctcgccttaatgcaatg
tctacgaggtataaggagtctatatctaagagcaccagggggtggaaggaaagatggttt
tcccgcaactctcctatgtctgatatcggatctgatgtaagaagagaggtaaatgttgga
atagataccgtgtcccgtatgatggagcatatgcaaacgagggacaatgggagacccagc
ggtgacactgagcctgacgtttctgagatcagtcaagctcgtgagcctgttactcaacat
ggggtggacggtgttgtgttgtctggagatgacaacaggacgcaagcaccatgtgctgca
cactcgggttctgactga
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