Amaranthus tricolor (tampala): 130812604
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Entry
130812604 CDS
T09367
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130812604
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
130812604
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
R3H-assoc
PutA_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
130812604
NCBI-ProteinID:
XP_057534111
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Position
5:20543614..20554084
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AA seq
1063 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNMKSVAKDFEKDDQTHRILA
TLRDHFGSVNCVRWAKHGRHIASGSDDQVILIHERRPGSGTSEFGSGEPPDVENWKVVMT
LRGHTADVVDLNWSPDDSMLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGT
FIASQSDDKTVIIWKTTDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGDWTATFDFLGHNAPITVVKFNHSMFKRSFSSSQDVKASSTGWANGSSKSRG
KELQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGS
VSTFHFEVKEIGQKLTDDELDELKRNRYGDVRGRQTNLAESPAQLLLEAAAAKQNTSKKV
VDLQKQQVALKPSSDLGIMSKVSDSHLDNAKKNGVSSDGLNKLSASGRVTCPVKQKEYRR
PDGRKRIIPEPVGVPPQQENITSLSHSQALNLPLVSSDVNKDDNVAKARRTSDVKERSVL
TAKACFSDSLVIERVPAASGRDVGVLVESIGSAKASSSLASCNATLAICVVDRKEGSDAM
PIKLEASPREHTISDIVGVSNMSSVKETEIICSRGSQTLWSDRISGKVSVLAGNANFWAV
GFEDGCLQVYTKCGRRAMPAMMMGSAAMFIDCDESWRLLLVTKKGSLYLWDLFNRTCLLQ
DTLESLITADPNASSKDTATIKIISAKLSKSGAPLVVLATRHAFLFDMSLKCWLRVADDC
FPASNFASSWNLGSSQSGELATLQIDVRKFLARKPGWSRVADDGMQTRSHLEAQLASALA
LKSPFEYRQCLMSYVRYLAREADESRLREVCESFLGPPTGMGTASLDLNMAWDPCVLGLK
KHKLLREDILPALASNRKVQRLLNEFMDLLSEYGSTENNIEQNNSIIPMTSRRATDRVAV
LPSLNDHMQLDTPVVEQIARKPEQTEAAQSFGNHQMDSVHKNQINEISPADDQVTAFSGK
DDTILEMVKGQVNPLPSSAEPMNIDMPKVEKVVVALPAKENST
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaaaaacccagttggattagacatgaaggtatgcagattttctccattgat
attcaacctggtggtcttaggtttgctaccggtggtggggaccacaaggttaggatatgg
aatatgaaatcagttgctaaagattttgaaaaggacgaccaaacacaccggattcttgca
acactacgtgatcactttgggtcggttaactgcgtcagatgggccaagcatggccggcac
attgcatcagggtctgatgatcaagtaattctaattcatgaaaggagacctggttcagga
acctcggagtttggtagtggcgagcctccagatgttgaaaattggaaggttgtcatgact
ttgaggggacacactgcagatgtggtggatcttaattggtctccagatgactcaatgtta
gctagtggaagtcttgacaacaccatccacatatggaatatgagtaatggcatatgcact
gctgttctcagaggtcattctagcttggttaaaggtgttacttgggatcccatcggcacc
tttatagctagccaatctgatgataagactgttattatttggaaaaccactgattggagt
cttgcccataggacagaaggccattgggccaaatctcttggatcaacattttttaggcgg
cttgggtggtctccttgtggccatttcataactactacacatggtttccaaaagcctaga
cattcggcacctgtgttggaaagaggtgattggactgctacttttgacttcttgggacat
aatgctcctattacagttgtgaagttcaaccattcgatgttcaaaagaagtttctccagt
tctcaagatgttaaagcttcgtctactggatgggctaatgggtcttcaaagtcccgagga
aaagaattacagccatataatgttattgctattggtagtcaggatcgtactataactgta
tggactactgcaagtgcacgtccactctttgtggcaaagcatttcttcactcaaagtgtt
gttgatttatcttggagtcctgatggatattcactttttgcttgttccttggacggctcg
gtgtccacctttcactttgaagtgaaagaaattggtcagaagctaactgatgatgaactg
gatgagctaaagagaaatcgttatggtgatgttaggggtcggcagactaacttagcagaa
agccctgcacaactattgcttgaagcagctgcagcaaagcaaaatacgagcaaaaaagta
gttgacttgcagaaacagcaggttgctttaaaaccttcatctgatttgggaattatgtca
aaggtgtctgattcacatcttgacaacgcaaaaaaaaatggagtaagctctgatggtttg
aacaagttgtcagcttctggtcgcgttacttgtcctgtgaagcagaaagagtacaggcgc
cctgatggtagaaaaaggattatccctgaaccagtgggtgtgcctcctcagcaagaaaat
ataacttctttgtcccactctcaagcacttaatttacctctagtatcttctgatgtcaat
aaggatgataatgttgctaaagccaggagaacttctgatgtgaaggaacgtagtgtgctc
actgctaaggcttgtttcagtgatagtttggtcattgaaagagttccagctgcttcaggc
agagatgttggcgttcttgttgaatctattggaagtgcaaaggcgtcaagttctttagca
tcttgtaatgctacacttgcaatatgtgtggtagataggaaggaaggttcagatgcaatg
ccaattaaattggaagctagccctagagagcatactataagtgacattgttggcgtgagt
aacatgtcatcggtgaaggaaacagaaattatttgcagcagaggatcccaaactttgtgg
tctgaccgaatttctggaaaggtctcagtgttggctggaaatgcgaacttctgggcggtg
ggatttgaagatggctgcctacaggtgtacacaaaatgtggaaggcgtgcgatgcctgcc
atgatgatgggttctgctgcaatgttcatagactgtgatgaatcttggagattgttgctt
gttacaaagaaggggtctttatatttatgggacttattcaaccgaacctgtctccttcaa
gatactttggaatctttgattactgcagatccaaatgcttcttccaaggatacagctact
atcaaaataatttcagcaaagctttcaaaatctggtgcacctcttgttgtgttagccact
cgccatgcttttctctttgatatgagcttgaagtgctggcttcgtgtagcggatgattgt
ttccctgcatcaaactttgcaagctcttggaatttggggtcctctcagagtggtgagctt
gcaacactgcaaatagatgttagaaaattcttggcgagaaaacctggctggagtagggtg
gctgatgatggcatgcaaactcgttcgcacttagaggctcagctagcctcagctttggct
ttgaaatctccgttcgaataccgccagtgtcttatgtcatatgttcgttaccttgcaaga
gaagctgatgagtctcgtttacgtgaagtctgtgaaagtttccttggtcctcctactggg
atgggtactgcatcattagacctaaatatggcatgggatccctgtgttcttggattgaag
aaacacaaacttttgagagaagacatccttcccgcactggcatcgaaccggaaagtacag
aggcttttaaatgaattcatggatcttctttctgaatatggaagtacagaaaataatatt
gaacaaaacaactcaattataccaatgacttcaagacgggctactgaccgagtagcagtg
ttgccatcattgaacgatcatatgcaactggatactcctgtcgtagagcaaatagctaga
aaaccagaacaaacggaagctgcacagtcgtttgggaatcatcaaatggatagtgttcat
aaaaatcaaataaacgagatttcaccagcagatgatcaagtgaccgctttctcgggaaag
gatgatacgattctagaaatggtaaaaggtcaggtcaacccgttaccgtcttctgccgag
ccaatgaatatagacatgccgaaggtagaaaaggtggtagtggctcttcctgccaaggaa
aacagcacatag
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