KEGG   Amaranthus tricolor (tampala): 130812613
Entry
130812613         CDS       T09367                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03030  DNA replication
atri03410  Base excision repair
atri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130812613
   03410 Base excision repair
    130812613
   03420 Nucleotide excision repair
    130812613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130812613
   03400 DNA repair and recombination proteins [BR:atri03400]
    130812613
Enzymes [BR:atri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     130812613
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    130812613
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      130812613
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 130812613
NCBI-ProteinID: XP_057534123
LinkDB
Position
5:complement(20666598..20694094)
AA seq 2207 aa
MNGDFRRRDRKDDRRRKKQQQTLRNAEDELESKLGFDVFTEGDKRLGWLLTLSSSSIQDQ
DSGNVYSCVDLYFVTQEGSSFKVKYKFRPYFYAATKDKMETDVEAYLRRRYENEIANIEL
LEKEDLDLKNHLSGLRKSYLKISFDTVQQLMTVRNDLLKVVDRNRAKFEAAQAYESIISG
KGQHRPLDFVDCITDLREYDVPYHVRFCIDIDVRCGQWYDVGISSTGVLLEKRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKPE
FEGCFKVRNVKNEVELLRSWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAHHGLKMDDEI
GFQCDKVQGECRARFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVR
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLM
VQAFKANVVCPNKHQSESEKFYNNKLLESETYIGGHVECLESGVFRSDIPTSFKLDPSAY
QQLIDNLDRDLQYAIKVEGKMDLDIVSNYDEVRDAIKDKLARLRDGPVREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTDEECTACDFNRPGKTCLRKLEWVWRGETYMAKKSDYHHVK
RQIESELVDSIPGQFSKSFLDLPKAAQQLKLKERLRKYCQKAYKRVLDKPATELREAGIC
MRENPFYVDTVRGFRDRRYEYKGLNKVWKGKLSEAKASGNPIKIQEAQDMVVVYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEKIGRPLELDTDGIWCV
LPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNRTYATHSECS
IEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
MFDKFLNGSTLEECYAAVAAVADRWLDLLDSQGKDIADSELLHYISESSTMSKSLADYGE
QKSCAVTTAKRLADFLGDAMVKDKGLLCQYIVASEPKGTPVSERAIPVAVFETETELMNF
YVRKWCKISSDVDIRSIIDWSYYRQRLSSAIQKIITIPAAMQKVANPVPRVAHPDWLHKK
VREKEDKFRQKKIMDMFSSKQDAMERIDAAAHDVDNGMGNHKVPDLEDFGKSGGSGVGSR
PVVHCYEANGQHSLQTTTSLANVPILDIDKSEDYVGWLEQKKRKWKENREKRKRQRLSDT
KTSKQAAGFSELNQSLANQKRNLGKNGVTSYFRRQELSLTSSYWQVLQLVPSDRPGQFLA
WVIVEGSMLKVPITVPRVFYLNSKAPVTEEFPGKWVNKILPHGHRSYNLIEIIIDEKEFR
EESKRLMAHLADPEVEGIYETNVPPEFNAVLQIGCVCKVDKTAKKRNAQAVWSLNELQMK
TTTECHYLDISLPFFYLYHSYCEGRAVYGGYFPASNMISFVVVDPHQNKSLNPTNIKRFY
HEACQALSGEPPSSQGVLSYKVDYVVQKDEAEKIMQKTISGHRPHSHRPGLAVIESPNIH
LLKSSIQVLNELPCVSIPANTRDSQYPAVGWQTVAAKIALQRCAASSQWLNERISLSRYA
HVPLGNLELDWIIYTIDVFFSRALRDNQQVLWISNDGRPDLGGFGEDDTCFVDEVNQPIL
IYPGAYRKVSVELKIHHLAINALLKSGQIKEIEGSGFHGFEQETDSDLYTSSEQYDFDEA
TSCEPAFRVLKQLVQRCLQDAITSGNVFADAILQHLYRWLCSPQSKLHDPAIYRMLCKIM
QKVFALLLAEFRKLGATVIFANYSKIILDTGKAGLAAGRAYCDSLLNALQTRDLFEWVEI
EPLHFWHSLLFMDQYNYGGIQAKDHDEFSASVSASSSTRLPGDLQGEIVSSWNIAEHLPK
STQEHFVVMVSEFMYKPWEYALNHIADEAIFEDGDLSTPSISVPVAEKFEALLIEFVKDQ
ISSYFTEKLFMLVREIFHSKETKKLQNDDDLPQVDPQLTRNVHTGDAALEFIKHICAVLA
LDQNVQHDVLVMRRNLLKFIRVREFAPEAEFSPPPPSFVLPNIICSYCNDVRDLELGRDP
SLLTQEWRCAVPQCGQPYDREMMENSLLQIVRQRERLYHLQDLACVKCHMVKDSHLIEQC
KCAGPFKCLEDASEFRRKMQVFYRIAVKQNFQLLRECVSWILEIRQC
NT seq 6624 nt   +upstreamnt  +downstreamnt
atgaacggagatttccgaaggcgagataggaaagatgatcggagaagaaagaagcagcag
caaacacttcgaaatgcggaggatgagcttgaatcaaaattagggtttgatgtttttact
gaaggcgataagcgccttggttggctactcactttatcatcttcttcgattcaagatcag
gatagcggaaatgtttatagttgcgtagatttgtattttgttactcaggaaggatctagt
tttaaggtgaagtacaaatttcggccctatttttacgcggccacgaaagataaaatggag
actgatgtagaggcatatcttagacggcggtatgagaatgaaatagctaacatagaactt
ttggagaaagaagaccttgatcttaaaaatcatttatctggtttacggaagtcatatttg
aagatatcatttgacacagtacaacagttaatgactgtgagaaatgacctgttaaaagtt
gtcgatagaaaccgagcaaagtttgaagcagctcaagcatatgagtcaatcatctctgga
aaaggtcaacatcggcctctagattttgtagattgtataactgatcttcgcgaatatgat
gttccttatcatgttcgattttgcattgacatcgatgtgaggtgtggacaatggtatgat
gttggtatatctagtactggtgttttgcttgagaagaggactgatctgctgcaacgggct
gaagttcatgtctgtgcatttgatatcgaaactacaaagcttcctctgaaattcccagac
gctgagtatgatttgataatgatgatttcatacatggttgatggtcaaggatatttgatt
ataaacagagagtgtgttggggaagatatagaagatcttgagtacactccaaaaccagaa
tttgaaggatgttttaaagttagaaatgtgaaaaatgaggtggagcttttaagaagctgg
ttttctcatatgcaagaagttaagcctggtatatatgttacgtacaatggggatttcttt
gattggccatttttggaacgcagagcagctcatcacggtttaaagatggatgatgaaatt
ggttttcaatgtgacaaggttcaaggtgaatgtcgtgctagattttcctgtcacctggat
tgctttgcctgggtgaagcgtgacagctatcttcctcaagggagtcatggtttgaaggct
gttaccaaagcaaaattaggttatgatcctttggaggtgaaccctgaagacatggttcgt
tttgcaaaagaaaaacctcagatgatggcttcttattctgtttctgatgctgtagcaacc
tattacttgtatatgacatatgttcatcctttcatattttccttggctactataatacct
atgcctcccgatgaggtcttgcggaaaggaagtggtactctctgtgagatgcttttaatg
gttcaggcgttcaaggcaaatgttgtctgtcccaacaaacaccagtctgaatcagaaaaa
ttctacaacaataaacttttagagagtgagacttacattggtggtcatgtggaatgcctt
gagagtggtgtttttagatctgacattccgactagtttcaaactcgacccatctgcatat
cagcaattaattgacaaccttgaccgggatttgcaatatgctattaaagtggaggggaag
atggacttggatatagtctcaaattacgatgaagttagagatgcaattaaagacaagcta
gctcgcttacgagatgggcctgtacgtgaagagtgccccctcatataccatttggacgtt
gctgctatgtatccgaatattattctaacaaacaggcttcagcctccatcaatagtcaca
gatgaggagtgtacagcttgtgatttcaatcgtcctggaaaaacttgtcttcggaaactt
gaatgggtgtggcgtggagaaacttacatggcaaagaaaagtgattatcaccatgtgaag
aggcaaattgaatccgaattggtggatagcattcccggtcaattttcaaagtctttcctt
gacctccccaaggcagcgcaacagttgaagcttaaggaacgtcttagaaaatattgtcaa
aaggcgtacaaacgggttcttgataagcctgctactgagcttcgagaagctgggatttgt
atgagggaaaatccattttatgttgatactgtgcggggctttcgagatagaagatatgaa
tataaaggactcaataaagtctggaaggggaagttatcagaagcaaaagcaagtggaaat
cctatcaagatccaggaagcgcaggacatggttgtggtgtatgattctttgcagcttgct
cacaaatgtatcctcaattccttctatggatatgtcatgcggaagggagcaaggtggtat
tctatggaaatggctggggtggtcacttacacaggagctaagataattcaaaatgctcgt
gtattggttgagaaaattggtcgaccacttgagttagatacagatggaatctggtgtgtg
ttaccagggtcatttcccgagaatttcacattcaaaacaaaagattcaaagaggaagttg
acaatctcttatccttgtgtaatgctcaatgtagatgttgcaagaaacaatacaaatgat
caataccagactttaaaagatccagtgaacagaacttatgcaacacatagtgagtgctca
attgaatttgaagtggatggcccatacaaggcaatgataattccagcttccaaggaagaa
ggcatactgatcaaaaagcggtatgcagtcttcaatgatgatgggacccttgcagagctc
aaaggttttgagatcaagcgtagaggtgaacttaagctcatcaaagttttccaggctgag
atgtttgacaaatttctgaatggatcaacattagaagaatgctatgctgcagttgctgct
gttgccgatcgctggcttgatctgcttgatagtcaaggaaaagacatagcagatagtgag
ctgctgcattatatatccgagtcaagcacaatgagcaagtctttagctgactacggtgaa
cagaaatcttgtgctgtgaccactgctaagcgcctagctgattttcttggagatgccatg
gtcaaagataaagggcttctttgtcagtacatcgttgcatctgagccaaagggtacacca
gtaagtgagagagcaattcctgttgcagtatttgagactgaaactgaacttatgaatttc
tacgtgcggaaatggtgcaagatttcatctgatgttgacataagatctatcatagattgg
tcgtattataggcaacgtttaagttcagctatccaaaaaatcataaccattccagctgca
atgcaaaaggtagcaaatcctgtacccagggtggctcatcctgactggctacacaagaaa
gttcgggagaaggaagacaagtttcgtcaaaagaagataatggatatgttctcctctaag
caagatgcaatggaaaggattgatgctgctgcgcatgatgtagataatggtatgggtaat
cataaagttccagatttggaggactttgggaaatcaggtggatcgggggttggtagtaga
cctgttgtacattgttatgaagcaaatggacagcattcattgcagacgacaacctcactt
gcaaatgtccccattttagacattgataagagtgaggactatgtcggatggctggaacag
aagaagcgaaaatggaaagagaacagagagaaaaggaagagacaaaggctttctgataca
aagacgtccaaacaagctgctggtttttctgagttaaatcagagtttggctaatcagaaa
agaaatctaggaaaaaatggagttacatcgtacttcagaaggcaagaattgtctctcaca
agcagctattggcaggttttacagctcgtcccaagtgataggccgggtcaatttttggct
tgggttattgtggaaggtagcatgcttaaggttccaatcaccgttcctagagttttctat
ctcaactctaaagctcctgtaactgaagaatttcctgggaaatgggtcaacaagattctt
ccacatggacatcgcagctacaatctgattgagataataattgatgagaaagaattcaga
gaagaaagcaaaagacttatggctcatttagcagatccagaagttgagggcatatatgaa
accaacgtgccaccagagttcaatgctgtccttcagatcggctgtgtctgtaaagttgat
aaaacagctaaaaaacgaaatgctcaagctgtctggagtctgaatgaactacagatgaag
accacaacggagtgccactatctggatatttccctccctttcttttacttgtaccacagt
tattgtgaagggcgagcagtatatggtggttatttcccggcgtctaacatgatttctttt
gttgtggtggatcctcaccagaacaaaagcttgaatcctacaaacattaagagattctat
cacgaagcttgtcaagctttgtctggggaacctccaagctctcaaggtgtcctatcatac
aaggtggattatgttgttcaaaaggatgaagctgaaaagatcatgcagaaaacaataagt
ggacacaggcctcacagtcacagacctggcttagctgtgatcgagtctccaaatattcat
cttttgaagtctagtatacaagttctaaatgaactcccatgtgtgagcatcccagccaat
actcgcgatagtcaatacccggctgttggttggcaaactgtggctgcaaaaattgcactg
cagagatgtgcagcgtcatcccaatggctgaatgagaggatttctctctcaagatatgca
catgtacccctggggaaccttgaacttgactggattatttacactatagatgtcttcttc
tcaagagctttacgtgataaccaacaggtactttggatttctaatgatggtcgtccagat
cttggtggctttggtgaagatgatacatgctttgttgatgaggtcaatcagcctatttta
atttaccctggagcgtacagaaaggtttctgtggagctaaagatccatcacttggctatt
aatgctcttctaaagagcggtcaaatcaaggaaatagagggtagtggttttcatggtttt
gaacaagaaacagattctgatctatacacatcgagtgaacaatatgactttgatgaggca
acctcctgtgaacccgcatttcgagtcttgaaacaactagttcaaagatgcctacaagat
gcgataacatcaggaaatgtttttgctgatgcaatattacagcatctctatcggtggctt
tgtagcccacaatcgaaacttcatgatccagccatatatagaatgctttgcaagataatg
cagaaggtgtttgcactacttttggcagagttccgaaaattgggtgctacagtcatcttt
gcaaattattctaagattattttagacactggaaaagctggtttagctgcaggaagagct
tactgtgatagtttgcttaatgcactacagacaagggacttatttgagtgggttgaaatt
gagccactacacttctggcactcattgcttttcatggatcagtataattatggaggaata
caggccaaagaccatgatgaattttctgccagcgtatctgcatcctctagtacacgttta
cctggtgatcttcaaggggaaattgtttctagttggaatattgctgaacacctgccaaag
agcactcaagaacattttgttgtgatggtgtccgagttcatgtataaaccatgggagtat
gctctgaatcatattgcagatgaagccatttttgaagatggtgacttgagcacaccatca
atatctgttcctgtagctgagaagtttgaggcacttttgattgaatttgtcaaagatcag
atcagctcttatttcacagagaaactctttatgcttgtccgtgaaatatttcattcaaaa
gaaacgaagaagctgcaaaatgatgatgacttaccacaagtggatccacagctgacccgg
aatgttcatacaggagatgctgcgttagaatttatcaaacacatatgcgctgttttggct
ttggaccaaaatgttcagcatgatgtcctggttatgagaagaaatttgctaaaatttatc
cgtgtgagagaatttgctcctgaagcagaattttctcctcctcctccgtcttttgtatta
cccaacatcatttgcagctactgcaatgatgtccgagaccttgagctgggaagggatccg
tcattactgacacaggagtggcgatgtgcagtgccacaatgtgggcagccttacgataga
gagatgatggagaattctctacttcagattgtaagacagcgagaacggctttaccatcta
caagatttggcatgcgtcaaatgtcacatggtaaaagatagtcacttgatagagcaatgt
aaatgtgccggtccttttaagtgtctggaggacgcttctgaattccgcaggaaaatgcaa
gttttttacagaatagcagttaaacaaaattttcaactcttgagagaatgtgtctcttgg
attcttgaaattagacaatgttag

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