KEGG   Amaranthus tricolor (tampala): 130812753
Entry
130812753         CDS       T09367                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130812753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atri03041]
    130812753
Spliceosome [BR:atri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130812753
 Complex B
    130812753
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 130812753
NCBI-ProteinID: XP_057534315
LinkDB
Position
5:29612259..29616374
AA seq 328 aa
MADKRKRERDNETAGAGHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTL
VLANMYQRPDMITPAVSVDPQVQPPSDPRKTQQHFEDFYEDLFEELSKYGEIESLNICDN
LADHMVGNVYVQFREEEHASEAFKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCN
RGGYCNFMHLKKISRELRRQLFGRYRRRRSRSRSMSPYRHGHGDRSRSGHGYGGGRDDDR
SRRNVDKERRARSRSPRRRGRSTSPAGSRRDRSPVRENSEERRAKIEQWNREREKAETGN
NDVSHDVIDNHAKDLADNGEDYFGHPNQ
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggataagagaaagagagaaagggataacgagactgcaggagcaggtcatttggct
tccatttttggaacagagaaggatagagttaattgtcctttctattttaagattggagct
tgcaggcatggcgatcgttgctcaaggcttcatactaagcccagtattagccctactttg
gtcctcgctaatatgtatcaacgccctgatatgattactcctgctgtttctgttgatcct
caagttcaacccccatctgatcctcgcaaaactcaacaacactttgaggatttctatgag
gatttgtttgaggaactaagcaagtatggggagattgagagtctcaacatctgtgacaat
ttggctgaccatatggtgggcaatgtttatgtgcagtttagagaggaagaacatgcttct
gaggcttttaaaaatttgactggaagattttatgctggccgtccaataattgttgatttc
tctcctgtaacggattttagagaagcaacatgtaggcaatatgaggaaaatgtgtgcaac
cgtggaggttactgcaactttatgcatttgaaaaaaattagcagggagctcagacggcag
ctgtttggaaggtacaggaggaggcgtagccgtagtagaagtatgagtccttacagacat
gggcatggagaccgttcccgtagtggccatggctacggtggtggaagagatgatgataga
agtcggcggaatgttgataaggaaagaagggctagaagccgtagcccaagacggagaggg
agaagtacaagtcctgcaggcagcaggagagataggagtccagtaagggagaacagtgaa
gagagaagagcaaaaattgagcagtggaacagggaaagagaaaaggcagaaaccgggaat
aatgatgttagtcatgatgtcattgacaaccatgcaaaggaccttgctgacaatggggag
gattattttggccatcctaaccagtag

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