Amaranthus tricolor (tampala): 130812780
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Entry
130812780 CDS
T09367
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130812780
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130812780
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF3688
GLMA_C
BRCT
Motif
Other DBs
NCBI-GeneID:
130812780
NCBI-ProteinID:
XP_057534358
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Position
5:11537029..11538879
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AA seq
333 aa
AA seq
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MKQREELAKCSKGFAGKMYNNFGKGLTYYVVTDPRDDPINPKKGTLRYGVTMVSGKVWIS
FSRDMDIKLARTLLIGSYTTIDGRGATINLSNAGLMLYNVTDVIIHGLRIHGVVPQPASQ
LMAPGGKLTSLSQIDGDAIRLLSAKKVWIDHNTLSKCEDGLIDVTLGSTSITISNNWFRD
HDKVMLLGHNDDYVDDKNMKVTVVYNRFGPNCHQRMPRVRHGYAHVANNLYLGWEVYAIG
GSSNPSIKSDHNLFVAPKGKSKEVIMNIKGKGKWFFRSVGDVLENGASFKESVEGFVKPN
YSVDEAFQVASGTIVRKLTRSAGALKCKGGSIC
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagagaagagctcgcaaaatgctcgaagggatttgccggaaaaatgtacaac
aacttcggaaaaggcttgacatactatgttgtcaccgatcctagagatgatccgattaac
cctaagaagggaactcttaggtatggagtcaccatggtgtccggaaaagtatggatctcg
ttttcgagagatatggacattaagcttgcaaggacattgcttatcggaagctataccacc
atcgatgggcgtggtgctactatcaatctttctaatgcaggcctcatgctctacaatgtt
actgatgtcatcatccatggcttaagaatccacggcgttgtaccccaaccagccagccaa
ctaatggcacctggcggaaagctaacttctttgagccagattgacggagatgccatcagg
ctgctcagtgcgaaaaaagtatggatcgatcacaataccctctccaagtgtgaggatggt
ctgattgatgtaacccttggctcaaccagcataaccatatcgaacaactggttccgtgac
catgacaaagtcatgcttctaggtcacaatgatgattacgtagatgataagaacatgaag
gttaccgtcgtctacaaccgcttcggacccaattgccaccaacgcatgcctagagttcgt
cacggttatgctcatgtggctaacaatttatacttaggatgggaagtttatgccattgga
ggaagctcaaaccctagtatcaagagtgatcataacctatttgttgcccccaagggtaaa
tcaaaagaggtcataatgaacatcaagggaaaaggaaaatggttttttagatctgttggg
gatgtactagagaatggagcctctttcaaggaaagcgttgaaggctttgtaaagccaaac
tacagcgttgatgaggcgtttcaagtggcaagtggtacaattgtgaggaaactaacaaga
tcagctggagctctaaaatgcaaaggaggatcaatatgctaa
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