Amaranthus tricolor (tampala): 130812781
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Entry
130812781 CDS
T09367
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130812781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130812781
03110 Chaperones and folding catalysts [BR:
atri03110
]
130812781
03029 Mitochondrial biogenesis [BR:
atri03029
]
130812781
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130812781
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130812781
Messenger RNA biogenesis [BR:
atri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130812781
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP60 / Chaperonin
130812781
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130812781
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130812781
Exosomal proteins of other body fluids (saliva and urine)
130812781
Exosomal proteins of breast cancer cells
130812781
Exosomal proteins of colorectal cancer cells
130812781
Exosomal proteins of bladder cancer cells
130812781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130812781
NCBI-ProteinID:
XP_057534359
LinkDB
All DBs
Position
5:23810979..23816709
Genome browser
AA seq
602 aa
AA seq
DB search
MACLPNPFSLISQKTISRHSSSSSSSFTMSTTTKAMAKQIYFNHDGSVTKKLQAGVDLVG
DLLGVTLGPKGRNVVLPNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDL
AGDGSTTSIVLARGLIDEGVKVTAAGRNPIQISRGIEKTAKALVSQLQLMSREIEDREIA
DVAAVSAGNDYAVGNMIAEALEKVGKKGVVRIERGTSTENRLQVVEGMQFDRGFLSPYFV
TDRRRMTVEYDNCKVLLVDKKITHPKEVFKMLENAVKGDFPILIIAEAIEQEALAPIIRN
KLKGALKAVAIKAPAFGERKSHCLDDIAILTGGTVVRDEIGLNLEKIGMDVLGSATKVVV
TNKSTLIVTDGSTRQAVEHRISELKAYAENVEGDFQQNIIHERIARLSGGIAIIEVGAPT
QIELKDKHLRIQDALNAAKAAVEEGVVVGGGCTLLRLSLTVDEIKEQLDNEEQKVGAEIF
RRALTYPIRKIAENAGVSGSVVVQKVLSNDNLRYGYNAASDCYQDLMEVGIIDPTKVVRC
CLEHAASVAKAFLLSDAVAVEIQEKQPFPRRPAMPSMPPMPSMPPMPSRPPMPMSGIRPR
GI
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtttaccaaaccctttctctttaatttctcaaaaaacaatttctagacattct
tcttcttcttcatcatcctttacaatgagcaccactacaaaggctatggctaaacagatt
tactttaatcatgacggttctgtcactaagaaacttcaggcaggggtggatctagtggga
gatttgttgggagtgacattgggtcccaaaggtagaaatgtggttttgccaaataagtat
ggacctccaagaattgttaatgatggtgagactgttctcaaagagattgagttggaagat
cctctagagaatgttggggtgaagttggtaagacaagctggtgctaaaactaatgatctt
gctggtgatggctcgacaacatcgatagttcttgctcgtggccttattgatgagggtgtg
aaggtcactgcagcaggcaggaatcctatccaaatctcacgtgggatcgagaagacagca
aaagctcttgtttcacagctgcaactaatgtctagagagattgaagatcgagaaattgca
gatgtggctgccgttagtgcaggaaatgattatgcagtaggcaatatgattgcagaagct
cttgaaaaagtcggtaaaaaaggtgttgtaagaattgagagaggaactagcacggaaaat
agactgcaggttgtagaaggaatgcagtttgatagagggttcttgtccccttactttgtt
actgatcgaagaaggatgacagtagagtatgacaattgcaaggtgttgttagttgacaaa
aagataactcatcctaaggaggtgtttaagatgttggaaaacgcggttaaaggagatttt
ccgatcttgataatagcggaggccatagagcaggaagcactggccccaataatcaggaac
aaattgaagggtgctctgaaagctgttgcaatcaaggcgcctgcgtttggtgaacgtaaa
agtcactgcttagatgacattgctatcttaacaggaggaactgtagtcagagatgaaata
ggccttaatctagaaaagataggaatggatgtattagggtctgctacgaaagtcgtagtg
acgaacaaatctactttgattgttactgatggaagcacaagacaagccgttgaacacaga
atatctgaacttaaagcatatgctgagaatgttgaaggtgattttcaacaaaatataatt
catgagagaatagcaaggttatctgggggtatcgctatcattgaggttggagctccaaca
cagatcgagctcaaggataaacatctacggattcaagatgcattgaatgcagctaaggcg
gctgttgaagaaggtgttgtcgttggtggtggatgtacccttttacgactgtcactgacg
gttgatgaaatcaaagaacagcttgataatgaagagcaaaaggttggcgcagagatcttc
agacgggctttgacttacccaataagaaagattgcggaaaatgcaggtgttagtggcagt
gtagttgtacaaaaggttcttagtaatgataacctgagatacgggtacaatgctgcaagt
gattgctatcaagatctaatggaggttggaattattgatcctacaaaggtggtcaggtgt
tgcttggagcatgcagcttctgttgcaaaggcatttctgctgtcagatgctgttgctgtt
gaaattcaagaaaaacaaccatttccaaggagacctgcaatgccatcaatgcctccaatg
ccttcaatgccaccaatgccatcaaggccaccaatgcccatgtcaggtatcagacctcga
ggcatttga
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