KEGG   Amaranthus tricolor (tampala): 130812866
Entry
130812866         CDS       T09367                                 
Name
(RefSeq) probable pectate lyase 12
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri00040  Pentose and glucuronate interconversions
atri01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:atri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    130812866
Enzymes [BR:atri01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     130812866
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix Pec_lyase_N
Other DBs
NCBI-GeneID: 130812866
NCBI-ProteinID: XP_057534475
LinkDB
Position
5:28797945..28803034
AA seq 466 aa
MVVRSCIVVLFIIFEVTDSALILPGQHPDPEAIANQLHRKVNASITRRHLSEDQVPNCAT
GNPIDDCWRCDPNWENNRQRLADCGIGFGQYALGGKGGEFYIVTDPSDHDPVNPKPGTLR
YAVIQTEPLWIIFASNMIIHLSEELIFNSYKTIDGRGADVHITGGGCITLQFISNVIIHN
IHIHHCYQSGNTMVRSSPTHYGLRGLSDGDGISIFGSKDLWIDHCSLSHCKDGLIDIIMG
STGITVSNNHFSHHNEVMLLGHSDTYEPDTGMQVTIAFNQFGPKLIQRMPRCRKGYIHVV
NNYFLQWEMYAIGGSSNPTINSQGNRYIAPYNPFAKEVTKRVDSNEKDWKGWNWRSEGDE
MVNGAYFVASGAGVEVKYEKAYSVEPKSASFIDQLVMYAGVLGDRRHNLGKWTAGPGDKS
ELDTNDYDYDYGGTSSSFSPPAYILVFLLLILSFLYLYIIPNINLL
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggttgtaagaagctgcattgtggtattattcatcatttttgaagttactgattctgcg
ctcattcttcctggacaacaccctgacccagaagccatagcgaaccaacttcacagaaag
gtgaatgcttctataacaagaagacatctaagtgaagaccaagttccaaactgtgcaact
ggtaatccaatcgacgattgttggagatgtgatccgaattgggaaaataatcgacaaaga
ttggcggattgtggcattggatttgggcaatatgctctaggcggaaaaggtggtgaattt
tatatagtcacggatccttctgatcacgatcctgtcaatcctaaacccggtacacttcgc
tatgctgttattcaaactgagcctctttggatcatctttgcttccaacatgattattcac
ctttctgaggagctaattttcaatagttacaagacaatagacggacgaggagcggatgtg
catataaccggaggaggatgcataaccttacaattcataagcaatgtgataatccataac
atccacatccaccattgctatcaatctggtaataccatggtcagatctagcccgacccat
tatggtcttcggggtttatcagatggggatggaatctccatatttggatccaaggatctt
tggattgatcattgctcattgtcccattgtaaagatgggcttatcgatatcataatgggc
tcgactgggatcactgtgtccaacaaccatttctcccaccataatgaggtcatgcttctc
ggccatagtgatacatatgagcccgatacaggaatgcaggtgacaattgcattcaaccaa
tttgggcccaagttaatacaaaggatgccaagatgtaggaaagggtatatacatgttgta
aacaattacttcttacaatgggagatgtatgcaattggaggaagtagcaatcccaccatt
aatagccaaggaaatcgttacattgctccttataatccttttgccaaagaggtgacaaag
agggtggatagcaatgagaaggattggaaaggatggaattggagatcggaaggagatgaa
atggtgaatggtgcatattttgtggcatcaggagcaggagttgaggtcaaatatgagaaa
gcttatagtgtcgaacctaaatcagcttccttcattgatcaactcgtcatgtacgctggc
gttctcggagataggagacacaacttggggaagtggacagcaggaccgggcgataaatca
gaattagatacaaatgattatgattatgattatggaggcacttcttcatcattttctccc
ccagcttacatccttgtatttcttttgttaattttgtcattcctttatttgtatatcatt
cccaacattaaccttctatga

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