Amaranthus tricolor (tampala): 130812920
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Entry
130812920 CDS
T09367
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130812920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130812920
03036 Chromosome and associated proteins [BR:
atri03036
]
130812920
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130812920
Coactivators
SAGA/TFTC/STAGA complex
130812920
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130812920
STAGA complex
130812920
TFTC complex
130812920
SAGA complex
130812920
SLIK complex
130812920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
SdbC_C
Motif
Other DBs
NCBI-GeneID:
130812920
NCBI-ProteinID:
XP_057534549
LinkDB
All DBs
Position
5:complement(30126067..30134438)
Genome browser
AA seq
557 aa
AA seq
DB search
MDSPPIPTPTTSSQPSMETPPIVTETPQPQPQPQPQPQPQPQAQPQPQPQPQAQPQPLEP
PSSSSQTPQSQPFQTPHTISSSSSPIPTPNPNPNPNPNPNPNPNPIPTNFPQQPPANNNI
STRPPFNRPWSQPTSQFSHFPSQFHSSSSSSSTSTPTSTSSPGVPPPQRVGIAIGVPASS
VSSQPSSFSSSFGAHFVGPPASSPSPARPSIHGMPSMGMIGSQLRPGGVPPSALLQQRPV
QAASGIRPQPASNSLPSASQNFQGHGMLRASSVSASSTSTPSTSQNQQSPHQPWLSAQHG
RPPLPSQSIRTQVNPQSLQQRSHIPQQSPQLLQEASLPHQLLPSSQQPQQIPASNQSQDN
HGQQLSSARVPQPLANQQLIRVQGSTNQKPPSPAIGQASIAPSGRPTENSNATEISEACS
TILSKRNIQEIVNQIDPSEKLDPEVEDVLVDIAEEFIDSITTFGCSLAKHRKSSTLEAKD
ILLHIDRTWNMTLPGFSGDEIRTYKKPVANDIHKERLALIKKSHTGAETGTNKTSAGPAT
GNVKGNFTKAATNVVGS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggattctccaccaattcccactcctacaacctcttcacaaccttcaatggagactcct
ccaattgttactgaaactccacaaccacagccacagccacaaccacagccacagccacag
ccacaagcacagccacagccacagccacagccacaagcacagccacagccattagagcca
ccctcttcttcctctcaaactccacaatcacaaccattccaaacacctcataccatttca
tcatcttcttccccaattccaacccctaaccctaaccctaatcctaatcctaatcctaat
cctaatcctaatccgatccccacaaatttccctcaacagccacctgctaacaacaacatt
agtactaggcctccatttaatagaccttggtctcaacccacttctcaattctctcatttc
ccttctcaatttcattcttcatcttcttcttcctcaacttctactcctacttctacttca
tctccaggtgttcctcctccacaaagagttggcattgctattggtgtcccagcttcttcc
gtttcttctcaaccttcttcgttttcttcctcttttggtgctcactttgttggtccacct
gcttcgtctccctctccggcacgtccatctattcatggaatgccgagtatggggatgata
ggctctcaattacgtcccggtggggttccaccttctgctcttcttcagcaaagaccagtc
caagcagcatcaggcattagacctcagcctgcatccaatagtttgccttctgcttcccag
aattttcaaggacatggcatgttgagagcttcctctgtttctgcctcgagtacatcaaca
cccagtacatcacaaaaccagcagtctccacaccagccgtggttatctgctcaacatggg
cgccctcctttgccatcccaatctatcagaacccaagtgaatcctcaatcgttacagcag
agatctcatatccctcagcaatcacctcagctgttgcaagaagcttcactgccacatcaa
ttattgccttcttcccaacagccgcaacagattccagcatcaaatcaatcccaagacaat
catggacagcagctctcgtcagctagagttccacaacctttagctaaccaacaactcatc
agggttcagggatcaacgaatcagaaacctccttccccagcaattgggcaagcaagcatc
gccccctctggccgccccactgaaaattcaaatgctactgagatatctgaagcttgtagc
acgatcctaagcaagagaaacatccaggaaatcgtgaatcagattgatccatctgagaaa
cttgatcctgaagttgaagatgttttagttgatattgctgaagaatttatcgactcgata
acgacatttggctgttcattggccaaacataggaagtcgagtacactggaagcaaaggac
atactgctgcatatagatagaacttggaacatgacgcttcctggatttagtggagatgaa
atcaggacctataagaaaccagttgctaatgacatacacaaagagcgcctagctctgata
aagaaatctcatactggagctgagacaggaacgaataaaacctctgccggaccagctaca
ggaaatgtgaaaggaaatttcactaaagcagctaccaatgttgtgggatcttga
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