Amaranthus tricolor (tampala): 130812932
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Entry
130812932 CDS
T09367
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
atri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130812932
09124 Replication and repair
03420 Nucleotide excision repair
130812932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130812932
03400 DNA repair and recombination proteins [BR:
atri03400
]
130812932
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130812932
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130812932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
ASFV_p27
Motif
Other DBs
NCBI-GeneID:
130812932
NCBI-ProteinID:
XP_057534565
LinkDB
All DBs
Position
5:complement(32080589..32085394)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNAIKGLFISCDIPMAQFIINMNANLPANQKFIIHVLDNTRLFVQPHAAEMIRSEISSF
REANTYEKPP
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgcaatcaaaggactcttcatttcctgcgatatacctatggcgcagttcatc
atcaatatgaacgcaaatttgccggcaaaccaaaaattcataatacatgtacttgataat
actcgcttgtttgtgcagcctcacgctgctgagatgataagaagcgaaatttccagtttt
agagaggccaatacttatgaaaaacctccgtaa
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