KEGG   Amaranthus tricolor (tampala): 130813064
Entry
130813064         CDS       T09367                                 
Name
(RefSeq) uncharacterized protein LOC130813064
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130813064
Enzymes [BR:atri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130813064
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130813064
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 zf-RING_10 Prok-RING_4 zf-ANAPC11 Zn_ribbon_6 zf-RING_4 RING_XB3-XBAT31 zf-Nse Rtf2 Sina_RING Zn_ribbon_LapB TerY_C zf-RING_6 YacG TRAF3_RING
Other DBs
NCBI-GeneID: 130813064
NCBI-ProteinID: XP_057534754
LinkDB
Position
5:complement(25195836..25203368)
AA seq 195 aa
MVLDVDLNVPLPDINNEVGSSLATAATQVQVNQRDSAAEMVPIDVDAFDDDVVVLSSPRA
ISEVRNISRRNRNRSNFVDVESETTRRVVTNTRSKRRRVPTSQPIIISDNGVNEIGVGSA
PPPPLPPPPPPPEPTFSCPICMGPLVEEMTTKCGHIFCKACIKKSISAQGKCPTCRKKVT
MKDTLRIYLPATTQS
NT seq 588 nt   +upstreamnt  +downstreamnt
atggtgttagatgtggatctcaatgtgccacttcctgatatcaataatgaagttggctcg
agcctagcgactgcggctactcaagtccaagttaatcaacgagattctgcagcagaaatg
gtgccaattgatgttgatgcattcgatgacgatgttgttgttttatcctctccaagggct
attagtgaggttagaaatatttcgagaaggaatcggaatagaagcaattttgttgatgtt
gaatcagaaactactagacgagttgtaactaatacccgtagcaagcggcgaagagtccca
acaagccagcctatcatcatctcagacaatggtgtgaatgaaattggcgttggttcggca
cctccaccgccattaccacctccccctcctcctcccgagcccacatttagttgtcctatt
tgcatgggtccattggttgaagagatgacaacaaaatgtggtcacattttctgcaaggcg
tgcatcaaaaagtcaatttcagctcaagggaaatgtcctacttgtaggaaaaaggtgaca
atgaaagatacactccgaatctaccttcccgcaacaactcaatcttaa

DBGET integrated database retrieval system