Amaranthus tricolor (tampala): 130813133
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Entry
130813133 CDS
T09367
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130813133
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130813133
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130813133
NCBI-ProteinID:
XP_057534855
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Position
5:complement(25820818..25827080)
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AA seq
447 aa
AA seq
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MAEISLRYFTLFTLLISAFFLSFVNGGLHKDEDELVTLRIEKQLKSIMNSSMADRAKEAG
VKNQQAVVERPEEIVSMVQRSISNSTARRNLGYFSCGTGNPIDDCWRCESDWHNNRKRLA
DCAIGFGRNAIGGRDGRFYVVTDPSDHDAVNPKPGTLRHAVIQEEPLWIIFQRDMVITLK
EELIMNSFKTIDGRGANVHIANGACITVQFITNIIIHGIHIHDCKPTGNAMVRNSPSHYG
FRGVADGDGISIFGSSHIWIDHNSLSNCADGLIDAVIGSTAITISNNYFTHHNEVMLLGH
ADSYVRDKVMQVTIAYNHFGEGLMQRMPRCRHGHFHVVNNDYTHWEMYAIGGSADPTINS
QGNRYLAPANPFAKEVTKRVTSDGNWKSWNWRSEGDLLLNGAFFTPSGSGAGASYAKASS
LAAKPSSLVGTLTAGSGALSCRRGRQC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatttctcttagatactttactcttttcacattgttgatttccgcgtttttc
ttgagcttcgtcaatggaggattgcacaaagatgaagatgaacttgtgactttaaggatt
gaaaaacagctgaaaagtatcatgaattcatcaatggcggatagggccaaagaagcagga
gtgaaaaaccagcaagctgtagttgagcgaccagaagagatagtatccatggtccaaagg
agtattagcaacagtacagcaaggagaaatctaggatatttctcatgtggaacagggaac
ccaattgatgattgttggagatgtgaatctgactggcataataaccgaaaacggcttgcg
gactgtgcaattgggtttggacgcaatgccattggtggtcgtgatggtcgattctatgtg
gtcactgatccaagtgaccatgacgcagtgaacccaaaaccaggtacactccgtcatgct
gtcatccaagaggagccactttggatcattttccaaagggatatggtgatcacattaaaa
gaagagttgatcatgaatagtttcaagaccattgatggaagaggagcaaatgttcatatt
gctaatggagcctgcattaccgtccaatttattaccaatattattatccatggtatccat
atccatgactgtaagccaaccggtaatgcaatggttagaaattcaccttctcattatggt
tttagaggagtagctgatggtgatgggatttctatctttggttcgagtcatatttggatt
gatcataactctctgtctaattgtgctgatgggctcattgatgctgttattggctctact
gccattaccatttccaacaattatttcactcaccacaatgaggtaatgttacttggtcac
gcggactcatatgtaagggataaagtgatgcaagtcaccattgcctataatcactttgga
gaaggacttatgcagaggatgccaaggtgtagacatggacacttccacgttgttaacaat
gattatactcactgggaaatgtatgccataggaggaagtgcagatcccaccattaatagc
caagggaatagatatcttgccccagcaaacccatttgctaaagaggtaaccaagagggtc
acaagtgacggaaattggaagagttggaactggagatcagaaggtgatttgctactaaat
ggagccttctttaccccatcaggctcaggagctggtgctagctatgctaaagcctccagt
ttggcagccaagccatcaagccttgttggcacccttactgctggttctggtgcactcagc
tgtcgtcgtggtcgacaatgctag
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