KEGG   Amaranthus tricolor (tampala): 130813153
Entry
130813153         CDS       T09367                                 
Name
(RefSeq) cyclin-T1-3-like isoform X1
  KO
K15188  cyclin T
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130813153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130813153
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130813153
    Brd4/P-TEFb complex
     130813153
    7SK RNP complex
     130813153
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB Cyclin_C_2 PapD_C
Other DBs
NCBI-GeneID: 130813153
NCBI-ProteinID: XP_057534897
LinkDB
Position
1:complement(40808493..40820447)
AA seq 603 aa
MASLVSGDSSHFGVSELSRVSQEKPEDGGRWYFSRKEIEENSPSRHDGIDLKKETYLRKS
YCTFLQDLGMRLKVPQVTIATAIIFCHRFYLRQSHAKNDRRTIATACMFLAGKVEETPRP
LKDVIVVSYDITHKKDPAAVQKIKQKEVYEQQKELILLGERVVLATLGFDLNVQHPYKPL
VEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGD
KVWWQEFDVTPRQLEEVSNQMLELYEQNRAPPNQVSEAEGSVAGSAANRPTSRTSTEEQV
PNSNSSHAGVATKPGTLKPPSSQQLPDHSNKQSVPPRGSHNRINDYGNSDHKAHGELRAV
EPSVYQENPVEGQNMKNGPEWNSSEDSKEKTNVGNRAKEGDSKDKYHGNNVESKEVGQTQ
SPSEIIEKIDTNKLKELREKRRKSRADVVRKKDSMDEYDPIMKELEEGVELAAAESEKMK
QEKKQNWTQPSTRLDNDGTHNSKLLETPGDRHPMCSKGQQSHGLDLENVEEGELSALEDS
SWDYQSPKSNDRKRKAGSPLDKTSDGKRWRDSMPGDFSEEKSRMGRLGYPDRDHKRHVPE
NHV
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggccagtttagtttccggagattcttcacatttcggagtatcagaattgagtagagtg
tctcaagagaagcccgaggatggtggccgatggtacttttctaggaaggagattgaagag
aattctccatctaggcatgacggaattgatttgaaaaaggaaacatacttgcgcaagtca
tactgcacttttctacaagatttaggaatgagactcaaagtacctcaggtaacaattgct
acagcaattattttttgccaccgtttttatcttcgtcagtcccatgccaagaatgacaga
aggactatagcgacggcttgtatgtttcttgctgggaaggttgaagaaaccccgcgtcca
ttgaaggatgtcatcgttgtttcttatgatatcacacataaaaaggatcctgctgcagtc
cagaagattaaacaaaaagaagtatacgaacaacaaaaagagctaattctactaggggaa
agggttgtacttgcaactcttggttttgatctaaatgtacaacatccatataaacctctt
gttgaggctataaagaaatttaaagttgcacaaaatgctcttgctcaggttgcatggaac
tttgtcaatgatgggctgcggacatctctttgcttgcagtttaagccccatcacatagca
gcaggtgccatattccttgccgccaaattccttaaagtcaaacttccttcagatggtgac
aaggtctggtggcaagagtttgacgtcaccccacgtcaattggaagaagttagcaatcaa
atgctagagctgtatgaacagaacagagcacctccaaaccaagttagtgaggctgaggga
agcgtagctggcagtgctgcaaatcgaccaacttcaagaacatcaactgaagagcaagta
ccaaatagcaactcttctcatgctggagttgctacaaagccaggaaccttgaagcctcca
agctctcaacagttgcctgatcattcaaataaacagtctgtaccccctagaggctcccat
aatcgaattaatgactatgggaattctgatcacaaggcccatggagaattaagggctgtg
gaaccctcagtttaccaagagaatccagtggaaggacaaaatatgaaaaatggccctgaa
tggaacagtagtgaagatagtaaagaaaaaactaatgtgggaaatagagcaaaagaaggg
gattcaaaagataaataccatggcaataatgtagaatctaaggaagttgggcaaacccaa
tcaccatctgaaattattgaaaagatagatacaaacaagttgaaagaattgcgtgaaaaa
agaaggaagtctcgggcagatgtagttcgaaagaaagactcaatggatgagtatgatcct
attatgaaggaactagaggagggggttgagttggccgctgctgagagtgagaaaatgaag
caggaaaagaaacagaactggactcagccctccacccgactagataatgatggtacacat
aacagtaaacttcttgagactcctggagatcggcatcctatgtgctcaaagggccaacaa
tcacatggactagatctggagaatgtagaagaaggtgagttgtctgcattggaagattct
agctgggattatcaatcacctaaatcaaatgatcggaagagaaaagctgggagcccacta
gacaaaacaagtgatgggaaaaggtggcgtgatagtatgccaggggatttttctgaagaa
aaaagcaggatgggccgccttggttaccctgacagagatcataaaaggcatgtaccagag
aatcatgtctga

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