Amaranthus tricolor (tampala): 130813219
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Entry
130813219 CDS
T09367
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130813219
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130813219
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_8
LRR_NXF1-5
LRR_At1g61320_AtMIF1
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
130813219
NCBI-ProteinID:
XP_057534978
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Position
5:19064817..19069152
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AA seq
650 aa
AA seq
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MAKFIKSENFFNMLSEEIVLLILNKLQDPISINSFSQTCKNFYLIESKQRRSAKLIRPDF
LPTITRRYPFLSHLDLSLCPRVTDSHLSLVSILGTSLLSIKLTLCRFVTGSGVSDLVSKC
PNLVELDLSNATELTDSTAAAISGAKKLEKLTMVRCKLVSDMGIGCIAVGCPRLKWVILK
WCLRVTDLGVRLLAIKCQELQSLDLSYVSITEKSLVPILQLAHLEELVLVGCLGIDDDGL
AFLNEGCSTLKRLDLSKCQNIGHTGLANLTRGARCLKEVILAYGSAVTLDVAKCFKKFSM
LQCLRLDGSSVTSSALRMIGNWSGSLRELSLSKCTGVTDDGIIYIVRKHTQLKKLDITCC
RKITSVSIDCITSSCTALLSLKMEACSQISADAFVLIGQRCQFLEELDATDNEIDDEGLK
SIAGCSRLSCLKLGICLKITDDGLMQVGMHCARIKEIDLYRAIKISDEGIASIAQGCSGL
ELINIAYCDQITDSSLLSLSKCTRLKVLEARGCPRITSDGLAAIAAGCRQLAVLDIKKCY
KIDNSGMIPLARYSVNLKQINLSYCSVTDVGLLVLASRSPLQNMTILHLSGLSPNGLAAA
LLTCRGLKKVKLHASFKALLPQSLLAHMESRGCVLHWRDKAFQPQIDTDW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattcattaaatcagaaaactttttcaacatgttgagcgaagaaattgttctt
ttgatccttaataagctccaagacccaatttccattaactcattttcacaaacttgcaaa
aatttttacttaattgaatccaaacagcgaagatccgccaaattaattcgacccgatttt
ctccctaccataacccgtcgttacccatttctctctcatcttgatctttctctttgccct
cgtgttactgactctcaccttagcttggtctccattttgggtacttctttgttatctatt
aagcttactttatgtaggtttgtaaccgggtctggggtttcggatttggtatcaaaatgc
ccgaatttggtggagttggaccttagtaatgctactgagcttactgattctactgccgct
gccatttccggggctaaaaagttggaaaaattgacaatggtgagatgtaaactggtttcg
gatatgggtattggttgcattgctgttgggtgtccgagattgaagtgggttattttgaaa
tggtgtttaagagttactgatttaggggttcgtcttcttgctatcaaatgtcaagaactt
caaagcttggatctttcttatgtctcgataaccgagaaaagccttgtgcctatcttgcaa
ctagctcatcttgaagaactagtcttggtgggatgtcttggcattgatgatgacggcctt
gcttttttaaatgaaggttgttccacgttgaagagacttgatttatctaaatgtcagaac
ataggtcacactggtctagccaatctaacaagaggtgctagatgtctgaaagaggtcata
ttggcatatggctctgctgttactcttgatgtggcaaagtgtttcaagaagttctcgatg
ttgcagtgtcttagactagatggttcctctgtcacgtcttctgcattgaggatgatagga
aactggtctggttctcttagagagctgagcttgagtaaatgcacaggcgtgacagatgac
ggcatcatttatattgtgaggaagcatactcagttaaagaaactagacattacgtgctgc
cgcaagatcacttctgtgtctattgactgtattactagttcttgtactgccctcttgtcc
cttaagatggaggcttgttctcaaatctcggctgatgcttttgtattgattggacagcgt
tgtcaatttttggaggaattagatgccacggataatgagatagatgacgaaggcctgaaa
tccattgctggatgttccaggctttcatgcttgaaattagggatctgcctcaaaatcacg
gatgatggtctgatgcaagtcgggatgcattgcgctagaataaaagagatcgatttatac
agggccataaaaatatcggatgaaggcattgcatcaatcgctcaaggttgctctggtctt
gagttgatcaacattgcatattgtgatcaaatcacagattcctctcttttatcattatca
aaatgtacgagattaaaagtattggaagccagagggtgccctcgtatcacgtcagatggt
ctagcggccattgctgctggatgccggcaacttgctgtccttgacataaagaagtgttac
aaaatcgacaactctggaatgattcctcttgctcgatattcagtaaacctcaaacagata
aacttgtcgtattgctcagttactgatgtagggctgttggtgttagctagccgaagccca
ttacagaacatgacgatattacatctgtccggactaagcccgaatgggctagcagctgcc
ttgctaacgtgtagagggctaaagaaagtcaaactccacgcatctttcaaagctcttctt
cctcagtcgcttcttgcccacatggaaagccgtggctgtgttcttcactggagagacaaa
gcctttcagcctcagattgacacagactggtag
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