Amaranthus tricolor (tampala): 130813266
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Entry
130813266 CDS
T09367
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130813266
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130813266
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
130813266
NCBI-ProteinID:
XP_057535048
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Position
5:24159450..24163067
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AA seq
407 aa
AA seq
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MASYVMLFLLFSLLTPTFVLSSPTVIHPDPELVVQEVHRQINESIARRSLGYLSCGTGNP
IDDCWRCDPNWHENRQRLADCAIGFGKNAIGGKNGRIYVVTDSGDDDPVNPKPGTLRYAV
VQDEPLWIIFERDMVIKLKEELIMNSFKTIDGRGTSVHIAGGPCITIQYVTNIIIHGINI
HDCKQGGNAMVRSNPHHYGWRTISDGDGVSLFGASHVWVDHCSLSNCADGLIDAIMGSTA
ITISNNYMTHHDKVMLLGHSDSYTADKNMQATIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSANPTINSQSNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLN
GAFFTASGAGASASYARASSLGARPSTLVGSITAAAGSLNCRKGSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctatgtaatgttattcttgttgttttctctcttaacacctacttttgttctt
tcttcaccaactgttattcaccctgaccctgaacttgttgtacaagaagtacacaggcaa
attaatgagtccatagctaggaggagcttgggttacctatcttgtggaacaggaaacccc
attgatgattgctggaggtgtgacccaaactggcacgaaaatcgccagcgtctagctgac
tgtgcaattggattcggaaagaatgccattggtggcaaaaatgggcgcatttatgtggta
actgattccggtgatgatgatccagtgaacccaaaacccggtacccttaggtacgctgtt
gtccaagatgaaccattatggatcatatttgaaagagacatggtaatcaaattaaaggaa
gagttaatcatgaactctttcaagacaattgatggtagaggaactagtgtccacattgct
ggtgggccatgtatcaccatacaatatgtgacaaacatcatcatacatggaattaacata
catgattgtaaacaaggagggaatgctatggtaagaagcaacccacatcattatggatgg
aggactatatcagatggtgatggtgtgtccctttttggtgctagtcatgtttgggtagat
cattgctctttgtccaattgtgcagatgggttgattgatgctatcatgggttctactgcc
attaccatttctaacaattacatgactcatcatgataaagtcatgttgttgggtcatagt
gattcctatactgctgataaaaacatgcaagctaccattgcttttaaccactttggtgaa
ggtcttgttcagaggatgccaagatgtagacatggatacttccatgtggtgaacaatgac
tacacccactgggaaatgtatgccataggtgggagtgctaaccctactatcaacagccaa
agcaacagatttttggcccctgatagaagattcagcaaagaggtgacaaaacatgaggat
gctccggaaagtgaatggaaaaattggaattggagatcagaaggagacctaatgctaaat
ggtgcattttttacggcgtcaggcgcaggtgcttcagctagctatgcaagggcatcaagt
ttgggtgctagaccatcaacccttgttggctcaattactgctgctgctggttcacttaac
tgtaggaaaggttctcgttgctga
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