Amaranthus tricolor (tampala): 130813416
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Entry
130813416 CDS
T09367
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130813416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130813416
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
130813416
Prokaryotic type
Archaeal type
TFB
130813416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
HTH_Tnp_ISL3
DUF7573
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
130813416
NCBI-ProteinID:
XP_057535236
LinkDB
All DBs
Position
1:42028345..42036941
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AA seq
312 aa
AA seq
DB search
MGDAYCTDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESNDNDPVRVG
GPSNPLLSDGGLSTVISKPNGTTGDYLSSSLGRWQNRGANPDRGLILAFKTIATMADRLG
LVSTIKDRASEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEVEMGKAVDMGTIHAGDFLRRFCSNLGMNNQAMKAAQEAVQKSEEI
DIRRSPISIAAAVIYIITQLSEEKKPLKDISLATGVAEGTIRNAYKDLYPHISKIIPTWY
AKEEDLKNLNSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgcatattgcacagattgtaagaaacacacagaagtagtgttcgatcattca
gcaggtgatacagtgtgttctgagtgcggacttgttcttgaatcgcactccattgatgaa
acatctgagtggagaacttttgctaatgaatcgaatgataatgacccggttcgtgttggt
ggcccgagtaatcctttgctttctgatggtggcctttctactgtgatatctaaacctaat
ggcactactggtgattatttatcttcgtcattggggaggtggcagaataggggtgctaat
cctgatcgtggtcttattcttgcgttcaagaccatcgccactatggctgataggttgggt
cttgtttcaacaataaaggatcgagctagtgagatatacaagaaggtagaagatcagaag
tcaagtagaggacgaaatcaagatgcaatattggctgcatgcctgtacatagcttgccgg
caagaggacaaacctcggactgtaaaagaaatttgttctgttgccaatggtgcaacaaaa
aaagagattggtcgggcaaaagaatacatcgtaaaacagttggaggttgaaatggggaaa
gcagtggacatgggaacgatacatgctggcgatttcttgagacgattttgctcaaatctt
ggtatgaacaatcaagccatgaaggctgcccaagaagctgttcaaaaatctgaagaaatt
gatataaggagaagtcccatttccattgcggctgcagttatctatattattactcaactt
tcagaggagaaaaaaccccttaaagatatatctcttgctactggtgttgcggaaggaact
ataagaaatgcttacaaggatctttatcctcacatttcaaagatcattccaacctggtat
gccaaggaggaagaccttaaaaacctcaacagtccatag
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