Amaranthus tricolor (tampala): 130813464
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Entry
130813464 CDS
T09367
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic-like
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00730
Thiamine metabolism
atri01100
Metabolic pathways
atri01240
Biosynthesis of cofactors
Module
atri_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
130813464
Enzymes [BR:
atri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
130813464
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF2670
Motif
Other DBs
NCBI-GeneID:
130813464
NCBI-ProteinID:
XP_057535280
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Position
5:complement(14477972..14481232)
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AA seq
762 aa
AA seq
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MAALQVTLTTVCCKNDKDYAQYVLPRTSFLPRFDMLGNSVGAYSKEFHPSALNSGVQATL
TFDPPTSNTNKTKQTKHTVDPSSPDFLPLPSFEQCFPKSTKEYREAVHEESGHVLKVPFR
RIHLSGDEPHFDTYDTSGPQNISPQIGLPKLRKDWVDRREKLGLPRYTQKLYAKQGMITE
EMLFCAARENLDPEFVKSEVARGRAIIPSNKKHLELEHMIVGRNFLVKANANIGNSAVVS
SIEEEVHKLQWATMWGADTIMDLFTGRHIHETREWILRNSAVPVGTVPIYLEKVNGIAKD
LTWEIFKDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKHMTGIVSRGGSIHAKWCLSYHKE
NFAFEHWDDILDICNQYDIALSIGDGLRPGLIYDANDAAQFAELLTQGELTQRAWNKDVQ
VMNEGPGHIPMHKIPENMQKQLEWCQEGPFYTLGPLTTDIAPGYDHITSAIGAANIGSLG
TALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKCHPFAQARDDALSKARFEFRW
MDQFALSLDPMTAMSFHDETLPSEGAKVANFCSMCGPKFCSMKITEDVRKYAEEYGYGNA
EEAVQQGMEALSAQFLAAKKTISGEQQGEAGWDLILRMPFLSAFGLKKKYNTASLRGFII
TKKITKWWFIIFIHATFTFKYGFCISLKYCGIICSATFFQLPEDQCMMQDLFKKVGKNVN
EKLQCASTAHYSYGVRKAASANKKMNKTRNQYLISKASPFLK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacttcaagttaccttgacaacagtatgttgcaagaatgacaaagattatgcc
cagtacgtgcttcctaggacttcatttttgcctagatttgacatgctggggaattcagtc
ggtgcttacagtaaagagtttcatcctagcgccttgaattcaggtgttcaggccactttg
acctttgatccaccaacctcaaatactaataaaactaaacaaacgaagcatacagttgac
ccttcttcccccgactttcttcctcttccatcatttgaacaatgctttccaaagagcaca
aaagaatacagggaagctgttcatgaggaatcaggccatgtgctcaaggttccctttcgc
cgtattcatctatctggggatgaaccccatttcgacacttatgataccagtggcccccag
aatattagtccacaaattggactacctaaactgcgaaaggattgggttgacaggagagaa
aagttggggctaccgcgatacacccagaagctttatgctaagcagggaatgataactgaa
gagatgctgttctgtgctgctcgtgagaaccttgatcctgaattcgtgaagtcagaggtt
gctcgtggacgtgcaattatcccttccaacaagaagcatttagagctggagcatatgata
gttggaagaaattttctggttaaagctaatgcaaatattggaaattctgctgttgttagt
tcaattgaagaggaagttcacaaacttcaatgggcaactatgtggggcgcagacactatc
atggatttgtttacaggtcgacatattcatgaaacccgtgagtggatcctacgtaactct
gctgtaccagttggtacagttcctatttatcttgaaaaggtgaatggtattgccaaggat
ctcacctgggagatttttaaggataccttgattgaacaagcagagcaaggtgtggattac
ttcactatacatgctggagttctcctaagatacatccctctaacagccaagcacatgact
ggcattgtatctcgtggaggatccatacatgcaaagtggtgtttatcctaccataaggag
aattttgcttttgagcactgggatgatattcttgatatctgcaaccaatatgatatagca
ctatcaataggcgatggcctcaggcctgggttaatctatgacgccaatgacgctgctcag
tttgccgagctcttaactcaaggagaacttacacaacgagcctggaataaagatgtgcag
gtgatgaatgaagggccaggacacattccaatgcacaagattcctgaaaatatgcagaag
cagctggagtggtgtcaggaggggccattttacacactaggtccattaacaactgatatt
gcccctggttatgatcacataacctctgctattggtgctgccaatattggatcccttggc
actgcacttttatgctatgtgactcccaaagaacatcttggtttgccaaatagggatgac
gtgaaagcaggggttatagcgtacaaaatagctgctcatgctgctgatctagctaaatgc
catccgtttgcccaagcaagggatgatgcgttgagcaaagcaagatttgagttccgatgg
atggaccagtttgccctttcacttgacccaatgaccgccatgtctttccatgatgaaacc
ttgccatcagagggtgctaaggtagcaaatttttgctcgatgtgtggacccaaattctgc
tcgatgaagattactgaggacgtacgcaagtatgctgaggagtatggttatggtaacgct
gaagaagctgtacaacaagggatggaggctttgagcgctcagtttctggctgcaaagaaa
acaatcagtggagaacaacagggagaagctgggtgggatttgattctcagaatgcccttt
ttaagtgccttcggactcaaaaaaaaatataatactgcaagtctgcgaggatttataatc
acaaaaaaaatcactaaatggtggttcatcatattcattcatgcgactttcactttcaag
tatggattttgcatttcattaaaatattgtggaattatttgttcagctactttttttcaa
ctgcccgaggatcaatgcatgatgcaggatttatttaaaaaggttgggaaaaatgtgaat
gaaaaattgcaatgtgcaagtactgcacattacagctatggtgtccgcaaagctgcatca
gctaacaaaaagatgaataaaacaagaaaccagtacctgatcagcaaggcatcaccattt
ctcaaatag
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