Amaranthus tricolor (tampala): 130813477
Help
Entry
130813477 CDS
T09367
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130813477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130813477
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
130813477
INO80 complex (yeast)
130813477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
PSY3
NUDIX_5
Motif
Other DBs
NCBI-GeneID:
130813477
NCBI-ProteinID:
XP_057535297
LinkDB
All DBs
Position
1:complement(42100655..42115268)
Genome browser
AA seq
1532 aa
AA seq
DB search
MGRNSQFSFDNLFNLESLVNFQLPHPDDDSDYYGSSSQDESRGSQGGHSNGIMSEREAKK
RNRNRNNDDELENGYYRNSVTEERYRSMLGEHLQKYKRKLKDSSLSPAPARIPFSVPKSC
ATVPVAHKSRKFVTENQGVLREVEKAPEYMFRSYSQNMGNDYDAEFSLKYANDRMTQDPV
YLDIGEGITYEIPPNYDKVAATLNLPSFSDIRVEEFYLKSTLDLGSLAKMMAADRRFGRR
GRAGMGEVLPQFDSLQAKLKSLVCNDQAQSFNLKVTEEGLNSIPEGAAGRIQRSILSDGG
QMQFYYVKVLEKGDTYEIIERSLPKKQKAKKDPFVLEREEREKIGKVWVNIARRDIPKHH
RLLTNNHRKQCMEAKRLAEFCQREVKLKVSRSLKLMRGSVIRTRKLARDVLVYWKRMEKE
MAEVRKREEKEAAEALKREREAEEARRQQKRLDFLISQTELFSHFMQNKSTVRPSEASAG
AEEISNEEVEDEKAVEEDSEDAELKKEALRAAQDAVSKQKKLTSAFDDECLKLRQSPDSE
VPVEDASAPGSSNIDLLHPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGI
LADEMGLGKTIQAMAFLAHLAEDKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWG
GLQERQILRKNINPKRLYRRDAGFHILITSYQLLVTDEKYLKRVKWQYMVLDEAQAIKSS
SSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESH
AEHGGTLNEHQLTRLHAVLKPFMLRRVKKDVITELTGKTEITVNCKLSSRQQAFYQAIKN
KISLSELFDHTRGLSEKKFMSLMNIVIQLRKVCNHPELFERNEGTSYLYFGDIGNSLLPP
PFGDLEDISYAGGRNPITYQTPKLVYEDVIRGSGMLVSAAGRGLSRGCFEKYLNIFTPSS
VHRSIIPQANSTNAPSVTSETFGFTRLMGLSPEEVSFLANSSFLEKLMFAMSTQDRRYFY
EAVDLMDVKDGDIQIERGKVSAVIRMLLTPGKSASMSLRRKFATGPKDAPFESLVVDHED
RFMSNISLLHSTYTYIPQSRAPPIVSHCSDRSFSYQMIEDLHNPWVKRLFVGFARTSNYS
GPRKPNGPPHHLIEEIDSQLPVSQPALQLTYKIFGSCPPMRSFDPAKLLTDSGKLQTLDI
LLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRND
IFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKD
TVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEQKLKEVPLQVKDK
QKKRRVNKGIRINAEGDASLEDLDAVANEAVNIEPSPDPDKAKPNNKKRKAADKNGQTKR
KANKVTNAGIADVGLTSGNEFDDSIDNLEQQQRPKRPKRERPTKSVNENIEPAFTAMPVE
ALQQPEILSAIDRSSGGFSMSGQNLNFHPSSL
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaattcgcagttctccttcgataatcttttcaatctcgagtccttggtgaat
tttcaattgccgcacccggatgatgattctgattattatgggagtagcagtcaggatgaa
agcagaggtagtcaaggtggtcacagtaatggaatcatgtctgaaagggaagcaaagaaa
aggaataggaataggaacaatgatgatgagttagaaaatggatactataggaattccgtt
acggaagagcgttatcgatctatgttaggcgaacatcttcaaaaatacaagaggaagctt
aaagattcttctctgagtccagcacctgcacggatccctttctctgttccaaagagttgt
gctactgtgcccgtggctcataaaagtcgaaagtttgtaactgagaaccaaggtgtatta
cgtgaggtggagaaagctccagagtatatgttccgctcctattctcaaaacatggggaac
gattatgatgcagaattttcactaaaatacgcgaatgacagaatgacacaggatcctgta
tatttggatattggagagggtattacttatgaaattcccccaaattatgacaaggtcgca
gcaactctgaacttaccaagcttttcagatattagagtggaagaattttacttaaagagt
accttggatttgggttctctggctaaaatgatggctgctgataggaggtttggacgtaga
ggtagagctggtatgggggaggttttgccccaattcgactcacttcaagcaaaactgaag
tctctggtatgtaatgatcaggctcaaagtttcaatttgaaagtgacagaagaagggttg
aattcaattcctgagggagcagcaggaaggatacaaagatcaatattgtctgacggtggt
caaatgcaattttactatgtcaaggttttggaaaagggagatacatatgagattattgaa
aggagtttaccaaaaaagcaaaaggcaaagaaagatccatttgtacttgaaagggaggaa
agggaaaagatcggaaaagtctgggttaatattgctcgaagagatataccaaagcatcat
agacttcttactaacaaccatcgcaaacagtgtatggaagcaaagaggttggcagaattc
tgtcagagagaagtgaaattaaaggtgagtagatctctcaaattgatgaggggctctgta
attagaacaaggaaactggctagagacgttctggtttactggaaacgaatggagaaggag
atggcagaagtgagaaagagggaagaaaaagaagctgcagaagctctgaagcgtgaacgt
gaggctgaagaagcaagaagacaacaaaaaaggcttgattttcttatttcacaaacagaa
cttttcagtcatttcatgcagaacaagtctactgtacgcccctctgaggcctctgctggt
gccgaggaaattagcaatgaagaagttgaagatgaaaaggctgttgaagaagattcggag
gatgctgaattaaagaaagaggctctaagggctgctcaagacgccgtttctaagcagaaa
aagttgactagtgcctttgatgatgagtgcttgaagttgcggcaatcaccagatagtgaa
gttcctgttgaagatgcctcagctcctggatccagcaatattgatctacttcatccatct
actatgccggttacatcgacagtacagacaccggagttatttaaaggctcattgaaagaa
tatcaattgaaaggcctccaatggcttgttaattgctacgaacagggtctaaatggtatt
cttgctgatgagatgggattagggaagactatacaagcgatggccttcttggcccatttg
gctgaggataaaaatatatggggcccatttctagtggttgctccagcatcagtcttgaat
aattgggccgatgaaataagtagattttgccctgatctaaaaacacttccatactggggt
ggacttcaagaacggcagattctcaggaaaaatattaacccgaaacgactttatcgaagg
gatgctggatttcatatactcatcacaagctaccaattattggttactgatgagaagtac
ttgaagcgtgtcaaatggcagtacatggtactagatgaggctcaggcaatcaaaagttca
agcagtataagatggaagactcttcttagttttaactgtcggaatcgtttgcttctgacg
ggtacacccatccagaacaatatggcagagttatgggctcttctacatttcatcatgccc
actctgtttgatagccatgagcaattcaatgaatggttttcaaaagggatagagagtcat
gcagagcatggaggcaccttaaatgaacaccagctaactagactgcatgcagtactcaaa
ccttttatgttgcgccgggttaagaaagatgtgataactgagctgactggaaagacagag
ataaccgtgaactgcaaattgagttcccgacaacaagctttttatcaagctataaagaat
aagatttctctgtctgagctttttgatcatactcgtgggcttagtgagaagaagtttatg
agtttgatgaatattgttatccagttgagaaaggtttgcaatcatccagaactatttgaa
aggaatgagggtacctcatatctttattttggagacattggaaattctttgctacctcct
ccatttggggacttggaggatatatcatatgctggtggtcgaaatcctataacataccag
acacccaaattagtctatgaagatgttatacgtggttctgggatgcttgtttctgctgct
gggcgtggtctcagtagagggtgttttgagaaatacctcaacatatttaccccgagttct
gtacatcggtccataataccccaagcaaacagcactaatgcgccatctgtcacaagtgaa
acatttggctttactcgtttgatgggcctgtcgcctgaagaggtttccttcttggctaat
agctctttcttggagaagttgatgtttgctatgtcgacacaagatagacggtatttttat
gaggctgtagacttgatggatgtaaaagatggggatattcaaattgaaagaggaaaagtt
agcgctgtcatcagaatgttgttaacacctggaaaatctgctagtatgtctctgagaaga
aagtttgcaactggtccaaaggatgctcctttcgagtctctggtggttgatcatgaggat
agattcatgtcaaacatttcacttcttcattcaacatatacttacatcccacaaagtaga
gcaccaccgattgtttcccactgttcggatagaagtttctcttatcaaatgattgaagac
ctacataacccctgggtcaaaagactttttgttgggtttgctcggacatctaattatagc
ggacctagaaagccaaatgggccccctcatcatttgattgaagagatagattcccaacta
cctgtatctcagccagcacttcaactgacatacaagatttttggttcttgtccacccatg
cggagttttgatccagcaaagttacttactgattctgggaagctacagacccttgatata
ttattgaagcgtttgagagctgagaatcaccgggttcttttatttgcacaaatgacaaaa
atgctaaatattcttgaggactacatgaattatcgaaaatacaggtatcttagacttgat
ggatcatcaaccattatggatcggcgggacatggttagagactttcaacttaggaatgat
atttttgtatttcttctgagtacgagggcaggtggcctgggcatcaatctaactgctgct
gatactgtgatattctatgaaagtgactggaatccaactttggatttgcaagcaatggat
agagcccatcgtctgggtcagaccaaagacgttactgtctaccgtttgatttgcaaagat
acagttgaagaaaagattttgcaaagagcaagtcaaaaaagtactgttcagcagcttgta
atgactggagggcatgtacaaggagatttgttggcacctgaggatgttgtatcgttactc
atcgacgatgcacaattagaacagaaattgaaggaagtgccattacaggtcaaagataaa
caaaagaaaaggcgggtgaacaaaggtatacggataaatgcagaaggagatgcgtctttg
gaagatcttgacgcggttgcaaatgaagctgtcaatattgaaccctctcctgatccagat
aaggcaaagcctaacaataagaagagaaaagctgctgataaaaatggccaaacaaagcga
aaggctaataaagtcacgaatgcaggaatagctgatgttggcttaacttcagggaatgag
tttgatgactccatcgacaaccttgaacaacaacaaagaccgaagaggccaaagagggaa
cgaccgacaaagagtgtgaacgaaaatattgaacctgcatttaccgctatgcctgttgag
gccctacagcagcccgaaatcctatctgctattgatcgaagttctggtggattttcaatg
tcggggcaaaatctcaactttcatccgagcagtttgtag
DBGET
integrated database retrieval system
