Amaranthus tricolor (tampala): 130813681
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Entry
130813681 CDS
T09367
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130813681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130813681
03110 Chaperones and folding catalysts [BR:
atri03110
]
130813681
03029 Mitochondrial biogenesis [BR:
atri03029
]
130813681
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130813681
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130813681
Messenger RNA biogenesis [BR:
atri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130813681
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP60 / Chaperonin
130813681
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130813681
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130813681
Exosomal proteins of other body fluids (saliva and urine)
130813681
Exosomal proteins of breast cancer cells
130813681
Exosomal proteins of colorectal cancer cells
130813681
Exosomal proteins of bladder cancer cells
130813681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130813681
NCBI-ProteinID:
XP_057535505
LinkDB
All DBs
Position
5:complement(21241151..21247001)
Genome browser
AA seq
570 aa
AA seq
DB search
MYRVASSLIRSSAAKRLVNSRVIASRNYVAKDVNFGVGARAAMLQGVNEIAEAVKVTMGP
KGCNVIIERNHKDPKVTKDGVTVAKSIKFHDRAKNLGAELVKQVAKATNTAAGDGTTCAT
VLTQAILVEGCKSIAAGVNAMDLRTGINMAVDAVVSNLKSKAVMISTPEEITQVATISAN
GEREIGEIVARAMEKVGKEGVITVSDGNTLDNELEVVEGMKLARGYISPYFITHQKTQKC
ELENPLVLIHEKKISDMASLVRVLELALQMNRPLLIVAEDIEGDALTMLILNKHQAGLKV
CAIKAPGFGESRKASLDDLAVFTGGEVISEECGLTLDKIRPEMLGCAKKVTISMDDTIVL
NGGGDKKLIEERCEELRTSMENSTSTFDKEKAQERLSKLSGGVAVFKVGGVSEAEVGERK
DRVIDAVNATKAAVEEGIVPGGGAALLYATKVLENIPTKNDDQKRGVQIVQNALKAPTFT
ILSNAGHDAPLIIGNLLEKNDETVGFDASKGEYVNMVKAGIIDPVKVIRTALVDAASVSS
LLTTTEATIIDHPEQSRVPQRVPDMDQMDL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtgtagcatcttcactgatcaggtcttctgctgctaaacgactggtaaacagt
agggtaattgcgagtaggaattatgttgccaaagatgttaattttggtgttggagctcga
gcagcaatgctgcaaggagttaatgagattgctgaagctgtcaaagtcactatgggacct
aagggttgcaatgtaatcattgaaaggaaccataaagaccctaaagtcacaaaagatggt
gttacggttgccaagagcattaagtttcacgatagagctaagaatcttggtgcagaactc
gtaaaacaggtcgcgaaggctacaaatactgctgctggagatggaacaacgtgtgctact
gtcttgactcaggcaattttagtggaaggatgcaaatccatagctgctggtgtaaatgca
atggatctgcgtactgggatcaatatggcagttgatgctgtggtgtccaacttgaaaagt
aaagcggtgatgataagtaccccagaggaaatcacacaggtggctactatatctgctaat
ggtgagcgtgaaattggtgaaatcgttgctagggcaatggagaaagttggaaaggaaggc
gttatcactgtttccgatggaaacacattggataatgaactagaggtggtggagggcatg
aaattagccaggggttatatttctccttattttattacccatcagaagacccaaaaatgt
gaacttgagaatccgttggttctaatccatgagaagaaaatatcagatatggcgtccctt
gttagagtattggagttggctcttcagatgaatagacctctactaatagttgccgaggat
attgagggtgatgccctaaccatgttaattctcaacaagcatcaagctggacttaaggtt
tgtgccattaaagctccaggatttggagaaagccggaaagctagccttgatgatctagct
gtatttacaggaggagaggtgatctcagaagagtgtggtttgactctcgacaagattcga
ccggaaatgcttggttgtgcgaagaaggttaccatttctatggatgacactattgtttta
aatggagggggagacaagaagctgatagaagagcgctgcgaagagcttagaacttccatg
gagaatagtacttcaacatttgacaaagagaaggcacaagaaagattatcaaagctttct
ggtggtgttgctgtcttcaaggttggaggtgttagcgaggctgaagttggtgagcgaaag
gatagggtcatagatgctgtgaatgctacaaaagctgctgtcgaggagggtattgtgccc
ggtggcggcgctgctctcctctatgctacaaaagttctggagaacatcccgactaaaaat
gatgaccagaaaagaggagttcaaatagttcagaatgctctcaaggcacctacatttacc
attttgtcgaatgctggtcatgatgctccgttgataattggcaatttgttggaaaagaat
gatgaaactgtcggttttgatgcctctaaaggcgaatacgtgaacatggtaaaagcagga
atcatcgatcctgttaaagttattagaacagcattggtcgatgctgcaagtgtttcctct
cttctgaccacaacggaagctactatcatcgaccatcccgaacagagcagagtcccacaa
cgcgtgcccgacatggatcaaatggacttgtga
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