Amaranthus tricolor (tampala): 130813887
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Entry
130813887 CDS
T09367
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130813887
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
atri00535
]
130813887
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130813887
Meiosis-specific proteins
Cohesin complex and associated proteins
130813887
Proteoglycans [BR:
atri00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130813887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
TMF_DNA_bd
DEAD
AAA_29
ORC6
Motif
Other DBs
NCBI-GeneID:
130813887
NCBI-ProteinID:
XP_057535773
LinkDB
All DBs
Position
5:complement(11247826..11279138)
Genome browser
AA seq
1205 aa
AA seq
DB search
MHIKQVVIEGFKSYKEQVATETFSSKVNCVVGANGSGKSNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGNQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIEVVKYLDERLKELDEEKEDLRKYQQLDKQRKSLEYTIYEKELQDARQKLA
KVEEERDKASEKSTAMYDEILKSEEKSKVLDKDYKRLTKELQVLSKEKIAVEKRREEAIK
RKTKLELDCRDLKERISGSSRAKNGAAKLLEAVKQEILESRHELDNIKPYFDDLKMQEDV
MTKGIMEREKKLSLLYQKQGRATQFSSKADRDKWLQKEIDELERVLASNMSQEQKLQGEI
ENLNAQLRERDEFIQSRKAILASLENNISQSNEGFITLKGVRDKLQDERKSLWERENELS
SEIEKLKSEVVKAEKNLDHATPGDIRRGLASVRRIAEQYRIQGVYGSVIELLDCDERFFT
AVEVTAGNSLFHVVVDTDETATQIIRHLNASKGGRVTFIPLNKVKPAHINCPQSDDVVPL
LKKLKFQEMYTKAFSQVFGRTVVCRNLDVAARVARADGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLKFMNIVKQNTKVINLKEEELAEVRFQLQDIDHKITEKVTEQQKIDADRAHQRS
EMEQLRQDIADANKQKRSLSTALEKKEKLLANVRTQIEQLNGNISLKRAEMGTDLVDHLT
PEERNLLSRLNPEIKEMKENLMECRTKLVEIETKKLELETNLSTNLLRRQQELEAVISSA
ENEKLPAEAELKQNEVDEAKSLVEQATEELRRVSGSMENITKELKKIKLENDKLQKLRDD
YEKQLQKEAEELEHLISNKNMLLARQEEYSKKIRELGLLPSDAFETYRRKGTKELHKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREALQLRQGELDAGDEKIKELIEVLDQRKDESIE
RTFKGVARNFREVFSELVQGGHGFLVMMKKKDGDIGDDDQDEDRPRETDTEGRVEKYIGV
KVKVSFTGQGDTQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADQANTQFITTTFRPELVKVADKIYGVTHHKRVSRVNVVSKDEALQFIERDQT
QNADQ
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcatattaagcaggttgttattgaaggatttaagagttataaagaacaagtagctact
gaaacattcagttcaaaggtcaattgtgttgttggtgctaatggttctggcaagtcaaac
ttttttcatgctatccgatttgtgctaagtgatcttttccaaaaccttcgtagtgaggat
aggcatgctttacttcatgaaggagcaggaaatcaggttttgtctgcatttgtggagatc
gtgtttgataattcagacaaccgaatcccggttgataaagaagaagttcggttgaggcgt
acaattgggctaaaaaaggatgaatattttttggatggaaagcatatcacgaaaacggag
gtcatgaaccttctagaaagtgcaggcttttctcgttcaaatccttactatgttgtacag
caaggaaagattgcgtcattgactcttatgaaggattctgaacgactagatctgctcaaa
gaaattggaggtactcgggtttatgaggagaggcgacgtgagagtttgaagattatgcaa
gaaactggaaataaacgaaaacagataattgaagtagtgaaatatttggatgagcggttg
aaggagctggatgaggaaaaggaggatctgagaaaatatcagcagcttgacaagcaaagg
aaatccctggagtatactatctacgaaaaggaactccaggatgctagacagaagttagcg
aaggttgaagaagagcgagacaaagcttccgagaagtcgacagcaatgtatgatgagatt
cttaagtctgaggagaaaagcaaggtcttggacaaggactacaaaaggcttaccaaagag
ttgcaagtgttgagcaaagagaaaattgctgttgagaaacgccgtgaagaagcaataaag
aggaagacaaagctagagcttgattgcagagatttgaaagagagaatttccggaagctca
cgtgccaagaatggtgctgccaaactgcttgaggctgtaaagcaggaaatcttggaatca
agacatgaacttgacaatattaagccttattttgatgatctgaagatgcaggaggatgtg
atgacaaaagggataatggaacgtgaaaagaagctcagtcttctttatcagaaacaaggt
cgggctactcaattttctagtaaagctgaccgagataaatggcttcaaaaagaaattgat
gaacttgagcgggttcttgcttcaaatatgtcacaagagcagaaactgcagggtgaaatt
gaaaatcttaatgctcagctcagggagagagatgagtttattcaatcccgaaaagcaatt
ttggcatcacttgaaaacaatatcagccagtcaaacgaggggtttatcacattgaaggga
gtaagagacaagctacaagatgagcggaagtccttatgggagcgagaaaatgaattgtcg
tctgagatagaaaagttaaagtctgaagtagtaaaggcagagaaaaaccttgatcatgca
actcctggtgatattagaagaggactggcctctgttagaagaatagctgagcaatacaga
attcagggtgtatatgggtcagttattgaattgttggactgtgatgagaggttttttacc
gctgttgaagttactgctggaaatagcttattccatgtggtggttgatacagatgaaaca
gcgactcagattatcagacatctcaatgcatcaaagggaggacgagtgacatttatacct
ctgaacaaggtcaagcctgctcatatcaattgtccacaaagtgatgatgtagtacctttg
ttgaagaaacttaagttccaagagatgtatactaaagcattttcccaggtatttgggaga
accgtggtttgccggaatctggatgtggcagcaagggttgcccgtgctgatggtttagac
tgcattactctggaaggtgaccaagtaagcaagaaaggtgggatgacggggggattttat
gattataggaggtcaaaattgaagtttatgaatatagttaagcagaatacaaaggttatc
aatctgaaagaggaggaattggcagaagttaggttccagcttcaagatatagatcataaa
attactgagaaagttacagagcagcagaaaatagatgctgatcgtgctcatcaaagatct
gaaatggaacagcttcgtcaggatattgctgatgctaacaagcaaaagagatcactatct
actgctctggaaaagaaggaaaaattgcttgcgaatgtacgcacacagatcgagcaactt
aatggtaatatatccctgaaacgggctgagatgggtactgatcttgttgatcacttgact
cctgaggaaaggaatctactgtctcgattaaacccagagatcaaggaaatgaaggaaaat
ctcatggaatgccggactaagcttgtcgagatagaaacgaaaaaattggagcttgaaacc
aatctttccacaaatttattacgtcgccaacaagagttggaggctgttatatcgtctgcg
gaaaatgaaaagttgcctgctgaagcagagttaaaacagaatgaagtggatgaagctaaa
tctttggtggaacaggcaacagaagaactcagaagagtttctgggtcaatggaaaacata
acaaaggagctcaagaaaattaaacttgaaaatgataaattgcagaaattgagagatgac
tatgagaagcagcttcagaaggaagcagaagaactagagcatttaataagcaacaaaaat
atgcttcttgctagacaggaggaatactcaaagaaaatcagagaattgggtcttttgcca
tccgatgcttttgaaacatatagacggaaaggcactaaagaattgcataagatgcttcat
aagtgtaatgaacagctccaacagtttagccacgtcaacaaaaaggctctcgatcagtat
gtaaactttacagagcaacgagaagcgctccagttaaggcaaggtgaacttgatgctggt
gatgagaaaattaaagaactaatcgaggttctagatcaacggaaagatgagtcaatagag
cgtactttcaagggtgttgcgcgaaactttagagaagttttctctgaacttgtgcaagga
ggtcacggattcttggttatgatgaagaaaaaggatggtgacattggggatgatgatcaa
gatgaagacaggcctcgtgaaacagatactgagggaagggttgagaaatatattggagtg
aaagtaaaggtatcatttactgggcaaggggatacacaatctatgaagcagttatctggg
ggtcagaaaaccgttgtagcattggcattgatctttgctatacagcgatgtgacccagct
ccgttttatctttttgatgaaatagatgcagcactggatcctcagtacagaactgctgtt
gggaatatgatacgtaggttggcagaccaggcaaatacacaatttataactacaacattt
cgacctgagcttgttaaggttgctgacaagatttacggagtgacacaccataaacgagtt
agtcgggtgaatgttgtgtccaaagacgaggctttacaatttattgaacgagaccaaact
caaaatgctgatcaataa
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integrated database retrieval system
