Amaranthus tricolor (tampala): 130813952
Help
Entry
130813952 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130813952
KO
K17925
sorting nexin-13
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atri04990
]
130813952
Domain-containing proteins not elsewhere classified [BR:
atri04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130813952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
130813952
NCBI-ProteinID:
XP_057535878
LinkDB
All DBs
Position
1:4674773..4689591
Genome browser
AA seq
1117 aa
AA seq
DB search
MSTQRQLVTARDLVDEAKKRIVILSICVVGLSYLMSLTSTSVWVNLPAAVVLVILFRYFS
LDFEMRRKEAAYNSKSYGNVSMEKTQISANDVIQEKPLDGPKASLMMDNWRRKVNSPPVE
DAIDHLTRHIVSEWVTDLWYSKLTPDLDGPEALVQLMNSVLGEFAHRMRNINLIDLLMRD
VIHLICKHLELFRICQAKIKKNLASLTFDERDMELKLVLAAENKLHPLLYSAESEHKVLQ
HIMDGVLSLTFKPEDLQCSFFHYVSRELLACAVIRPVLNLANPRFINERIEQVVMSAKKR
NGRGATANDSSLLNQNGDTSDNFSPFPDPSTTGVELVELKSNQSKSSLNDLSGGKVDNKD
ASKDPLLSVDARSTRSWSSLPMGPAAAASSNIDRSASGGEWGDMLDYISHKKTRALAPEH
FENMWSKGRNYNNEAEAVNHILPRDPSIRRSNTVNSSNVNIKQKESGLKTASVERGVILR
GSNLRPQSETMYIHADRNTLSPPPLTSDEDDEERKLMLLDETNSESSQSSSGDEENRVTG
LDSPTTKVWDGRTNRNSGVSHIHHPLEGLVGKKGKRTNKIQHQRLHRQQSGRKRSRLGSQ
KTSLWQEVERTSFLSGDGQDLHPLKANVKDDDSSDDYDMETMGRLQSGTTASSSAASLLP
GSFASSANSPQSTFLGDTFFKLRCEVLGANIVTSSSKMFAVYSIAVTDAENNSWSIKRRY
RHFEELHRRLKEYPEYNLHLPPKHFLSTGLDVPVILERCKLLDQYLKKLMQLPTISASID
VWDFLSIDSQTYTFSSAFSIVETLTVKSHENIASLSGRGGPKMNHLKTRTDCAESENDQS
LWMNHSSMDGLKCDMKSTTNSPAKKGSGGESDNKIQKKVSADQYVGRKGNAIAGDVKQDA
VDDPTFPEEWVPPNLTGPILEFVDVVFQLREGAWIRRKAFWVVKQVLQLGMGDALDDWLV
EKIQRLRRGSIVASGIKRVEQILWPDGIFITKHPSRQKPPASGSQSQSPSPSQLSSPKAE
DVDTTAELQESEAERRAKFVYELMIDNAPSAVVSIIGRKEYEQCAKDLYYFLQSSVCLKQ
LVMDLLQLLLLYTFPELDPVFKQLHEEKHKFGEFKVA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacagcggcagttggtgactgctcgtgacttggtcgatgaagcaaagaagcga
attgtcattctttcaatatgtgttgttggtctttcttatcttatgtctttgacaagtacg
tcagtttgggtgaatctccctgctgcggttgttctggtcattcttttccgttatttttcg
ttggattttgagatgcggcgaaaagaagcagcctacaatagcaagagttatggaaatgtt
tccatggagaagactcagatttccgcaaatgatgtgattcaggagaagcctcttgatggt
cctaaagcttcccttatgatggataattggagaaggaaagtcaattcccctcctgttgaa
gatgcaattgatcatttgacaagacacatagtttctgaatgggttacagatctctggtat
tccaaattaacccctgatctggatggtccagaggcactagtgcaattaatgaatagcgtt
ttgggagaatttgcacatcgcatgaggaatattaatctcattgatcttctgatgagggat
gttattcatctgatctgcaagcatctggaactttttcgtatctgtcaagcaaagatcaag
aagaatttggcatcacttacttttgatgaacgcgatatggagctgaaactagtccttgct
gctgaaaacaaattacacccacttctttattctgctgagtcagaacataaggtattgcag
cacataatggatggtgtcttgtctttaactttcaagcctgaagatctacagtgttctttc
ttccattatgtttctcgagagcttcttgcttgtgcagtaattcgaccagttctaaacttg
gccaatcccaggtttataaatgaaagaattgaacaagtagtaatgtctgcaaagaagcga
aatgggagaggtgcaacggcaaatgattcctcactcttaaaccagaatggagatacttcc
gataatttctcaccgttcccagatccctctaccactggcgttgaacttgttgagcttaag
agcaatcaatctaaaagttctttaaatgacctcagtggagggaaggttgacaataaagat
gcttccaaggatcctttgctttcagttgatgcccgatctactcgttcttggagttctctg
cctatgggacctgcagctgctgctagtagcaacattgatcggtctgcctctggaggtgaa
tggggtgatatgttggattatatttctcacaagaaaacacgggctcttgctcctgaacac
tttgaaaatatgtggtccaaggggcgaaattacaataatgaagctgaagcagtgaatcat
attcttcctcgagatccttcaataaggagatctaatacagttaattcttcaaatgtcaac
ataaaacagaaagaaagtggactcaagactgcttccgttgagagaggagttattcttcgt
ggttccaatttgaggcctcagtctgaaaccatgtacatacatgctgatagaaatacgttg
agtccacctccgcttacatcagatgaagatgatgaggagcgcaaacttatgcttttggat
gagacaaattctgagagcagtcaaagctcttcaggtgatgaagaaaatagagtaacaggt
ttagattctccaaccaccaaagtttgggatggtagaactaatcggaattctggtgtttct
catatccatcatccacttgagggcttagtgggaaagaagggtaaaaggactaacaaaatt
cagcatcaaaggttgcatagacagcaaagtggccggaaaaggtctagattaggcagtcag
aagacgtcattgtggcaagaggttgagaggacaagctttttatcaggagatggacaagat
ttacaccctttgaaagcaaatgtgaaagatgatgactctagtgatgattatgacatggag
actatgggtagacttcagagtggaacaactgcttcttcatctgctgcttcattgttacct
ggaagctttgcatcgtctgccaactcccctcaaagtactttcctaggagatacatttttt
aagttgagatgtgaggtcttaggcgcaaatattgtcacgagtagctctaaaatgtttgcc
gtttattccattgcagtcacagatgctgaaaataacagttggtcgattaaacgaagatat
cgacattttgaggagctacatcgacgtttgaaagaatatccagagtacaatctccactta
ccgccaaaacattttctgtctactggccttgatgtgcccgtaatactagaacgctgtaaa
ttgcttgatcaatacttaaagaagctcatgcagcttccaactatttcagcatcaatagat
gtgtgggacttcctaagcattgactctcagacttacacattttccagtgccttttctatc
gttgagacattgacagttaagtcacatgaaaacattgcaagcttatctggccgtggaggc
ccaaagatgaaccacttgaaaactaggacggattgtgcagaatctgaaaacgatcaatcg
ttatggatgaatcatagttctatggatggtttgaaatgtgatatgaaaagcactacaaat
tcacctgccaaaaagggctcaggtggagagtcagataacaagatacaaaaaaaagtttct
gctgaccaatatgttggaagaaaagggaacgcaattgcaggggatgtgaaacaagatgct
gttgatgatccaacttttcctgaggagtgggtgccaccaaaccttactggacccattttg
gaatttgtagatgttgtttttcagcttcgggaaggagcatggatcaggcggaaagctttt
tgggtagtcaaacaggtgttgcagttgggaatgggtgatgctcttgatgattggttggtt
gaaaagatccagcgtttacggagagggtctattgttgcttcagggatcaagagggttgag
cagatactttggccagatggaatattcataacaaagcatcctagcaggcaaaaaccccct
gcctctggtagccaatctcaaagtccatctccaagtcagctatcatcacctaaggcagag
gatgttgatacaactgctgaacttcaagagagtgaggctgaaagacgtgccaagtttgtc
tacgagctaatgattgataatgccccttctgctgttgtaagcattattggacgtaaggag
tatgaacagtgtgctaaggatctgtactacttcctccagtcatctgtgtgtctgaagcag
cttgtcatggatcttctccaacttttacttttgtatacattcccagagttagaccctgta
ttcaagcagctccatgaagaaaaacacaagtttggagaattcaaggttgcttga
DBGET
integrated database retrieval system
