Amaranthus tricolor (tampala): 130813994
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Entry
130813994 CDS
T09367
Name
(RefSeq) exopolygalacturonase clone GBGE184-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130813994
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
130813994
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Astro_p19
Motif
Other DBs
NCBI-GeneID:
130813994
NCBI-ProteinID:
XP_057535938
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Position
5:complement(26929048..26940376)
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AA seq
444 aa
AA seq
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MAITRGIGFTIILVLAFSYIHFEVEGHRGLATPTNGNVSFDVTQFGAKGNGKPHNDANGE
SLNGLAIMKAWQKACHCSQGPSKVVIPEGIYMVAQVIFAGPCKYEVIVELQGTMVADKDV
SQFPNHEFVVFQDVDAATFTGPGTIDVSNQASKYNTLDQNKDVDFFNLMASIKILKSKNV
LVERITSVNPSAYHVLIVESENVKVQNMKLNEKSMKNKKSKTNNGIYIGASNNISVSSSI
INTGGDCVTVAPGSLHISISALTCQSGQGISIGSKAYIDTSLDVKGVIVKDCSFKETTFG
VRIIPRLEAKTSLISDIKFEGLKMEQVQVPIVINQLQPLLNPLETIQAKIVGVEYKNIQG
TTTGKNPLSFSCNSETPCEGIEVVNVDLSFIDKLPLNANHGINLNSLIGPTLIPGDALKL
LVKCLNANVLFRGENNGLGCNLLQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctataactagagggattggatttacaatcatcctagttttagccttttcatacatt
cattttgaggttgaaggtcatcgtggccttgcaactcccactaatggtaatgtaagtttt
gatgttactcaatttggtgcaaaaggaaatggcaaaccacataatgatgctaatggtgaa
tccctcaatggattagctatcatgaaagcatggcagaaggcatgccattgtagccaaggt
ccatcaaaggtagtcatccctgaaggcatatatatggtggctcaagtaatatttgcaggt
ccatgtaaatatgaagtaattgttgagcttcaaggaacaatggtggcagataaggatgtt
agccaattcccaaaccatgaatttgttgtgtttcaagatgtggatgctgctactttcact
ggaccaggaaccattgatgtctctaaccaagcctctaagtacaacacacttgaccaaaat
aaggacgttgacttctttaatctaatggcttctatcaaaatattaaagtcgaaaaatgtg
ttggtggagagaatcacatctgtaaatccttcagcataccatgtattaattgtggagagc
gaaaatgtgaaggtccagaatatgaaattgaatgaaaaatcaatgaaaaataagaaaagt
aagactaataatggaatatatattggtgcatcaaataatataagtgtgagcagtagcatt
atcaatactggtggtgactgtgttactgttgcccctggctcacttcatatttctatctct
gcactcacttgccaatctggtcaaggaattagtattggatcaaaagcatacatagatacg
tcattagatgtgaagggggtaatagtgaaggattgcagtttcaaggaaaccacatttggt
gttaggattattcctcgtttggaagccaaaacaagccttatatctgacatcaaatttgag
ggtttgaaaatggagcaagttcaagtccctattgtcattaaccaactacaacccctcctt
aatccattagagacaatacaagcaaagatagttggtgttgaatataagaacatacaaggt
actacaactggaaagaatccactctcgttttcatgcaacagtgaaactccttgtgaaggt
attgaagtggtcaatgttgatctaagcttcattgacaaattacccttaaatgcaaatcat
ggtattaatcttaacagtttgattggcccaacattaataccaggagatgcattgaaactt
ttggttaaatgtttaaatgcaaatgtattatttagaggtgagaataatggattaggttgt
aatctacttcaataa
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