Amaranthus tricolor (tampala): 130814070
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Entry
130814070 CDS
T09367
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
atri04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130814070
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130814070
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130814070
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130814070
03019 Messenger RNA biogenesis [BR:
atri03019
]
130814070
03041 Spliceosome [BR:
atri03041
]
130814070
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130814070
Protein phosphatases and associated proteins [BR:
atri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
130814070
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130814070
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130814070
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130814070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
130814070
NCBI-ProteinID:
XP_057536050
LinkDB
All DBs
Position
5:15852873..15858763
Genome browser
AA seq
304 aa
AA seq
DB search
METAVLDDIINRLLEFRNGRPGTARQVQLSESEIRQLCAASKDVFLQQPVLLELEAPIKI
CGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPDLT
NVDQIKSITRPTDVPESGLLCDLLWSDPSREVKGWGMNDRGVSFTFGADKVAEFLMKNDM
DLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPSEK
KRFL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagctgttttagatgatataataaacaggctattggagtttcggaatggtaga
ccaggaactgctagacaggttcagctttctgagtcagagatccgccaactttgtgctgct
tctaaggatgttttcttgcaacaacctgttcttttggaacttgaagcacccattaagatc
tgcggtgatatccatggccaatatggggacttattgagactttttgaatatgggggcttt
cctcctgaagctaattacttgtttctaggagactatgtggatcgggggaagcagagttta
gaaacaatttgtcttttgcttgcgtacaaaattaaatatcctgaaaatttctttctttta
cgagggaaccatgaatgtgcgtccattaataggatctatggattttatgatgaatgcaaa
cgccgattcaatgtgagactttggaagatttttaccgactgttttaattgtcttcccgtg
gctgctgttattgatgacaaaatattgtgcatgcatggtggtctttctcctgatttgacc
aatgtggatcaaataaagagtataactcgtccaaccgacgttccagaatctggtttacta
tgtgatttattgtggtcagacccttctagagaggtcaaaggttggggaatgaatgatcgg
ggagtctcgttcacctttggtgctgataaagtggcagaattcctaatgaagaatgacatg
gacctaatttgtcgtgcacatcaggttgtggaagatggttatgaattttttgctgataga
cagcttgttacaattttttccgctccaaattactgtggtgaatttgacaatgccggtgca
atgatgagcgtggatgagagtttgatgtgctcgtttcaaatcttgaagccctcagagaaa
aaaagatttctttga
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