KEGG   Amaranthus tricolor (tampala): 130814125
Entry
130814125         CDS       T09367                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130814125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atri03041]
    130814125
Spliceosome [BR:atri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130814125
 Complex B
    130814125
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 130814125
NCBI-ProteinID: XP_057536129
LinkDB
Position
5:30711035..30717341
AA seq 269 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GIDAQGQPISPEALQSHFEDFYEDIFDELSKFGEIETLNVCDNLADHMIGNVYVQFREED
QAAAALGALQGRFYLGRPIIADFSPVTDFREATCRQFEEESCNRGGYCNFMHVKMIGREL
RRKLFGKFHNPRYRRRSRSRSRSRSPRGSRRREREREYDSRGSRERRHDDGRGRSGERRR
SRSPPPARDGSEERRARIEQWNREREEKQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcatcgattttcggtacagagaaagacagagtaaactgtccattc
tacttcaaaattggagcttgtcgccatggtgaccgctgttctcgactccataaccgtccg
acaatctctcctactcttcttctctccaatatgtaccagcgtcctgacatgataactcct
ggaattgatgctcaaggtcagccgatttctccggaagctcttcaatctcactttgaggat
ttttatgaagatatttttgatgaacttagcaagttcggagaaatcgaaactctaaatgtg
tgtgacaatctagctgatcatatgatcggaaatgtttatgttcaatttcgtgaagaagat
caagctgctgctgccttaggagctttgcaagggaggttttacttagggagaccgattatt
gctgatttttctcctgtgacggattttcgtgaggctacttgtcgacaatttgaagaggag
agttgtaatcgaggtggatattgtaattttatgcatgttaagatgattgggagggagctg
aggaggaaattgtttggtaagtttcataaccctaggtatcggaggaggagtagaagcagg
agccggagcaggagtccaaggggttcgcggaggcgagagagggagagggagtatgattct
cgtggaagtcgtgaaaggagacatgatgatggaagaggaagaagtggtgaaaggaggagg
agcagaagtcctccacctgctagagatggcagtgaggaaaggagagctaggattgagcaa
tggaatcgagagcgtgaggaaaaacaatga

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