Amaranthus tricolor (tampala): 130814218
Help
Entry
130814218 CDS
T09367
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130814218
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130814218
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130814218
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130814218
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130814218
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130814218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
130814218
NCBI-ProteinID:
XP_057536281
LinkDB
All DBs
Position
5:complement(10967798..10984902)
Genome browser
AA seq
1120 aa
AA seq
DB search
MTVMTPAPIAQEDDEMLVPNSDITDNHQPMEVVAQAESASTNNNNAEIQPVEDPSSSRFT
WKIDNFSRLNAKKHYSDVFVVGGFKWRILIFPKGNNVDYLSMYLDVADAQTLPYGWSRYA
QFSVAVVNQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVVEAE
VVVRKIVDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDIP
SASIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
GTVVEGTIQQLFEGHHMNYIECVNVNYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVER
LEGDNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD
LDRDDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTK
EDIKRALEEQYGGEEELPQPNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDV
AEHLRERLKREQEEKEHKKKEKAEAHLYTIIKVARDDDLTEQIGKDIFFDLVDHDKVKSF
RIQKQMPFNLFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTHVEETQSVGQLREV
SNKVHNAELKLFLEVELGIDLRPIPPPDKTKDEILLFFKHYDPEKEELRFVGRLFVKANG
KPGEIIGKLKEMSGYGAEEEIELYEEIKFEPTVMCEHIDRKLTFRGSQLEDGDIVCFQKV
LPAETVERCRYPDVPSFLDYVHNRQVVHFRSVERPKEDDFCLELSRLHTYDDVVERVARQ
LGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPEL
QGLKTLKVAFHHSTKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHK
IYKIFPSSEKIENINDQYWTLRAEEIPEEEKNLGPQDRLVHVYHFTKETAQNQMQVQNFG
EPFLLVIHEGETLAEVKVRVQKKLQVPDEEFSKWKFAFLSLGRPEYLQDTDVISSRFQRR
DVYGAWEQYLGLEHADTAPKRMYTANQNRHTYEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcatgactcctgctcctatcgcccaagaagacgatgagatgctcgttccgaat
tctgatattaccgataatcatcaacctatggaagttgttgcgcaagccgaatctgctagt
actaataataataatgctgagattcaacctgtggaggatccatcttcgtccaggtttact
tggaaaattgataatttctcgaggttgaatgctaagaagcattattcggacgtgtttgtt
gttggcggttttaaatggaggatacttatatttcctaaagggaacaatgtggattacttg
tcgatgtatcttgatgttgctgatgctcagactttgccttatgggtggagtaggtatgca
cagttcagcgtagctgtggtcaatcaaattcataacaagtattcggtgagaaaagataca
caacaccagttcaatgctcgggaaagtgactgggggtttacatcatttatgcctttaagt
gagttatatgatcccagcagaggttatcttgtaaatgataccgtcgttgtggaggctgag
gttgttgttcgtaagattgtggactattggtcctatgattcaaagaaagagactggattt
gttggattgaagaatcaaggagctacatgctatatgaattcactgcttcagacactattt
cacattccttattttaggaaggctgtgtatcatatgcccacaactgagaatgatattcca
tccgcaagcattcctttggctcttcagagtttattctacaaacttcagtacagtgatagc
agcgttgcaacaaaagaattgactaaatcttttggatgggatacatatgattcattcatg
caacatgatgtccaggagcttaatagagtcctttgcgaaaagcttgaagacaaaatgaag
ggtactgttgttgaggggactattcagcaactgtttgaagggcatcatatgaattatatt
gagtgtgtaaatgtgaattacaaatcgacaaggaaagagtccttttatgatcttcaactt
gatgttaaaggatgtcgtgacgtttatgcttcttttgataaatatgtggaagttgaaaga
ttggaaggtgataataagtatcacgctgaacaatatggtttacaggatgctaggaagggt
gtgttattcattgattttcccccagttcttcaattgcagcttaaacgatttgaatatgat
tttatgcgtgataccatggtgaagataaatgatcgttatgaattccctcttcaacttgat
ctcgatcgtgatgatgggaaatacttatctcctgatgctgatagaagtgtccgtaacctt
tacacactccacagtgttctggtacatagcggtggagtgcacggtggacattactacgca
tttataagaccaactctttctgatcaatggtacaagtttgatgatgaacgagttaccaag
gaagatataaagagagctctggaggagcagtatggtggtgaagaggagttgccacaacca
aatcctggtttcaacaacactcccttcaaattcacaaaatattcaaatgcatatatgctt
gtttatatacgtgaaagtgacaaagataaaattatgtgtaatgtggacgaaaaagacgtt
gcagaacatctcagggaacgtttaaagagggagcaagaggagaaagagcataaaaagaag
gaaaaggcagaggcacatctttacaccattataaaggttgctcgagatgatgacctaact
gaacagataggaaaggatatcttttttgatctagtggaccatgacaaagttaaatctttt
cgtattcagaagcaaatgccatttaatcttttcaaggaggaggttgctaaagaattcggc
atccctgttcaatttcagcggttttggctttgggcaaagcgtcaaaatcatacgtatcga
ccaaatcggccgttgacacatgtggaagaaacccaatctgttggacaactaagggaggtg
tcaaataaagttcataatgctgaacttaaattgttcttggaagtagagcttggaatagat
ttacgacctattccacctccggacaagacaaaggatgagattctgttgttctttaagcat
tatgatcctgagaaagaggagctccgttttgtaggaaggctttttgtcaaggccaatggt
aaaccaggagaaattattggaaagttaaaggaaatgtctggctatggtgctgaagaagaa
attgaattatacgaggaaataaagtttgaaccaactgttatgtgtgaacatattgaccga
aaactcacatttcgtgggagccagcttgaagatggagatattgtgtgtttccaaaaagtt
cttccagctgaaactgttgaaagatgccgatatccagatgttccctcgttcttggactat
gtgcataatcggcaagttgtccatttcagatcagtggagagacctaaagaagatgatttt
tgcctggagttgtcaagacttcatacttatgatgatgtggtggaaagagtggctcgtcaa
cttgggttggatgatccatctaaacttagacttacatctcacaactgctattctcagcag
ccaaagccccagcctattaagtatcggggtgtggatcatttgtcagatatgttagtccac
tacaatcagacttctgacatactgtactatgaagttctggatataccgttgccagaattg
caaggcttgaaaacattgaaagttgctttccatcattcaacaaaagatgaagtgaccatt
cacacaatcaggttgcctaagcagagtacagtgggggatgttcttaatgatcttaagaca
aaggttgaattgtcacatcctgatgctgagctaaggctgcttgaagtattttatcacaag
atctataagatattcccttccagtgaaaagattgagaacataaatgatcaatactggaca
ttacgagctgaagagattcctgaagaggagaagaatcttggtcctcaggaccggcttgtt
catgtgtaccattttactaaggagacagcccagaaccaaatgcaagtacagaactttggt
gagccttttttattggtgatccatgagggagaaaccttagctgaggtcaaggtgagagta
cagaagaaattgcaggttccagatgaagaattttccaagtggaagtttgctttcctttca
ttaggtcgtccagaatacctccaggatactgatgttatttcgagtcgttttcagagaaga
gatgtttatggtgcttgggaacagtatcttggattagaacatgctgacacagctcctaaa
agaatgtacactgcaaaccagaatcgccatacatatgagaagcctgtaaaaatctacaat
tag
DBGET
integrated database retrieval system
