KEGG   Amaranthus tricolor (tampala): 130814226
Entry
130814226         CDS       T09367                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    130814226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:atri03000]
    130814226
   03021 Transcription machinery [BR:atri03021]
    130814226
Transcription factors [BR:atri03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    130814226
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     130814226
  RNA polymerase III system
    TFIIIB
     130814226
  RNA polymerase I system
    SL1/TIF-1B
     130814226
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 130814226
NCBI-ProteinID: XP_057536289
LinkDB
Position
5:complement(12053038..12073170)
AA seq 200 aa
MAEQGLEGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV
IMRIREPKTTALVFASGKMVCTGAKSEQDSKLAARKYARIIQKLGFPATFKNFRIQNIVA
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFKKTQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcagaacaaggattggaaggtagtcaacctgtggatctgtcaaaacatccatctggg
atcattcctactcttcaaaatattgtatcaactgtcaacttggactgcaagttggatctt
aaatccattgctttgcaagctcgtaatgcggagtacaaccctaagcgttttgcggcagtt
attatgaggattagggagccaaaaacaacagctctggtgtttgcttctggaaaaatggta
tgcactggagcgaagagtgagcaggactcaaaactagcagctcgtaagtatgcgcgaatc
attcagaagctgggttttcctgccactttcaagaatttcagaatccagaacatagtggca
tcttgtgatgttaaatttcctatcagattggaggggcttgcctattctcatggtgccttt
tctagttacgaaccagaactatttcctggtctgatctatcgaatgaaacaaccaaagatt
gtgctgcttatcttcgtctctggaaagatagttcttacaggagctaaggtgagagaggaa
acctacaccgccttcgaaaacatatatccagtgcttactgaatttaagaaaactcagcaa
tga

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