Amaranthus tricolor (tampala): 130814226
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Entry
130814226 CDS
T09367
Name
(RefSeq) TATA-box-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130814226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130814226
03021 Transcription machinery [BR:
atri03021
]
130814226
Transcription factors [BR:
atri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
130814226
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130814226
RNA polymerase III system
TFIIIB
130814226
RNA polymerase I system
SL1/TIF-1B
130814226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
130814226
NCBI-ProteinID:
XP_057536289
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All DBs
Position
5:complement(12053038..12073170)
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AA seq
200 aa
AA seq
DB search
MAEQGLEGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV
IMRIREPKTTALVFASGKMVCTGAKSEQDSKLAARKYARIIQKLGFPATFKNFRIQNIVA
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFKKTQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaggattggaaggtagtcaacctgtggatctgtcaaaacatccatctggg
atcattcctactcttcaaaatattgtatcaactgtcaacttggactgcaagttggatctt
aaatccattgctttgcaagctcgtaatgcggagtacaaccctaagcgttttgcggcagtt
attatgaggattagggagccaaaaacaacagctctggtgtttgcttctggaaaaatggta
tgcactggagcgaagagtgagcaggactcaaaactagcagctcgtaagtatgcgcgaatc
attcagaagctgggttttcctgccactttcaagaatttcagaatccagaacatagtggca
tcttgtgatgttaaatttcctatcagattggaggggcttgcctattctcatggtgccttt
tctagttacgaaccagaactatttcctggtctgatctatcgaatgaaacaaccaaagatt
gtgctgcttatcttcgtctctggaaagatagttcttacaggagctaaggtgagagaggaa
acctacaccgccttcgaaaacatatatccagtgcttactgaatttaagaaaactcagcaa
tga
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