Amaranthus tricolor (tampala): 130814253
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Entry
130814253 CDS
T09367
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00750
Vitamin B6 metabolism
atri01100
Metabolic pathways
atri01240
Biosynthesis of cofactors
Module
atri_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
130814253
Enzymes [BR:
atri01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
130814253
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
Motif
Other DBs
NCBI-GeneID:
130814253
NCBI-ProteinID:
XP_057536326
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Position
5:complement(13511876..13513254)
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AA seq
312 aa
AA seq
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MSGSGVVTLYGNGAITETTTNTKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACA
VMALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGVDYV
DESEVLTLADDENHINKHNFQIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV
RHVRSVMGDIRVLRNMDDDEVFTFAKNISAPYDLVMQTKQLGRLPVVHFAAGGVATPADA
ALMMQLGCDGVFVGSGVFKSGDPSRRARAIVRAVTHYSDPEMLAEVSCGLGEAMVGINLN
DEKVERYATRSE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagcggcgtcgtaaccctttatggaaacggggctattacggaaaccacaaca
aataccaaatccccattttccgtcaaagtaggtcttgcccaaatgcttcggggcggagtt
atcatggatgttgtcaacgcagaacaagcccgaatcgctgaagaagctggtgcatgtgct
gttatggcacttgaacgtgttccagcggatatccgtgctcaaggcggtgttgcccgtatg
tctgacccgcaactaatcaaagaaatcaaacgggctgttaccattcccgttatggcgaaa
gcccgaattggccattttgttgaagcccaaatacttgaagcaattggggttgattatgtt
gatgaatccgaggttttaaccttagctgatgatgagaatcatattaataaacataatttt
cagattccgtttgtttgtggatgtaggaatttgggtgaagcattaagaaggatccgagaa
ggggctgctatgattcggaccaagggtgaagcaggcacgggtaatataattgaagcagta
agacatgtaagatctgtaatgggtgatattcgggttcttcgtaacatggatgatgatgaa
gtttttacatttgctaaaaatatttctgctccttatgatttagtgatgcaaactaagcaa
cttggtaggcttcctgttgtgcattttgctgctggtggggtggcaacaccagccgatgcg
gcattgatgatgcaattgggctgtgatggagtgtttgtcgggtcgggtgtgtttaaaagt
ggggatcctagtagaagggcaagagcaattgtgcgggcggttacacattatagtgaccca
gagatgctggctgaggttagttgtggattaggggaagctatggttgggattaacttgaat
gatgagaaggtcgagaggtatgctactcgctctgagtga
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