Amaranthus tricolor (tampala): 130814443
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Entry
130814443 CDS
T09367
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130814443
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130814443
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130814443
Protein phosphatases and associated proteins [BR:
atri01009
]
HAD phosphatases
Fcp/Scp phosphatases
130814443
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130814443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
130814443
NCBI-ProteinID:
XP_057536481
LinkDB
All DBs
Position
6:complement(29549887..29558179)
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AA seq
970 aa
AA seq
DB search
MMKTVVYEGENFLGEVDVYFENKNKNNIEIILKKGIKISHYTNESKRCSPLSVLHTITSN
GIGAPYFKLMESSNNKMHDFQQEQKSQLFALHANCLNDNKTAVVLHSEQEIHLVAMRSRR
TNGVTVTPCFWGFCVMPGLYESCLGLLNLRCLGIVFDLDETLIVANTLRSFEDKIGALLR
KISVETDHERIAGMAAEMKRFQEDKALLKQYAESDQVLDNGKIHNIQAEVVPALSDNLQT
VVRPLIRLQNKNIVLTRINPKNPDTSVLVRLRPAWNELRNYLSARGRKRFEVYVCTMAER
EYALEMWRILDPDSNLISSSELLDRIVSVKSGSKKSLFNVFHGGICHPKMALVIDDRLEV
WDEKDQPRVHVVPSFAPYYAPQAEANNTIQVLSVARNIACNVRGGFFKDFDESLLQRTSE
VLFEDDPKDITLPPDVSNYLVAENKGFGFNGNEELTCFNGMADVELKRRLKEAAISASFP
SVTSSNTVNFDTRLTSSLPFAVTTPMITPQPTHQASITPLRSNLFSQEGPLGRSLGNIGP
LDIGLQNSPVCKEGEIPESELDPDTRRRLLILQHGKDTRENIPSKPPFSVRPTVQAPVAG
PSPGPASFHGSVLGPVSWVQSRGNWFSNEEHTSTGRLSRLGTTEFPIPPDVLIEKQRLPV
SNPRKVDSSDWSDRTSIEKQRLPREASRRDDKLRSNYSLCNYQSFQGNNGSTLSRFASRN
KGFEVESERSSSLSRIFLGALHDIAMKCKTKVEFKSGLVASQELKFSMEAYFSGEKIGEG
TGLRRREAQQRAAEAAMINLAERYLVYSNSDTNAPQSDTSRGQSASDVRFVSDTNSHVDC
PSRIKETVAPSSEPTRLDDSHVDGSKNSVGSTSVLKELCTREDLTVNSKDQSPTSTNPVV
LDQIHAEVEVNGQVVGMGIGSSSDEANLQAAEPALASLKSMLGHFTKRPRSSRSVEGMPN
KRLKQSICRV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacagtagtatatgaaggtgaaaattttctgggagaagtagatgtatatttt
gagaataagaataagaacaatatagaaataatattgaagaaggggataaagataagtcat
tatacaaacgaaagtaagagatgttctccactatctgtactacatacaatcaccagtaat
ggaattggtgcaccttacttcaaattgatggagtcttcaaacaacaagatgcatgatttt
caacaagagcaaaaatctcagctttttgctttgcacgccaattgtctcaatgataacaag
actgccgtagttcttcatagtgagcaggagatacacttggtggcaatgcgttcgagaaga
acaaatggtgtaactgtaaccccttgcttctggggtttttgtgtaatgccaggattatat
gagtcttgtcttgggttgttaaacctcaggtgtctgggcattgtatttgaccttgatgag
accctgattgttgcaaacacactccggtcttttgaggataaaatcggagccttgcttagg
aaaataagtgtggaaactgaccatgaaaggatagctggtatggcggcagaaatgaaacgc
tttcaggaagataaagctttattgaagcagtatgctgagtctgatcaagtactagacaat
gggaaaattcataacattcaagcagaagtagttccagctctttctgacaacctccaaaca
gttgtccgcccccttattcggttacagaataaaaacattgttcttactcgaataaatcct
aagaatcccgatacaagtgttcttgtaaggctaagacctgcatggaatgaattgcgcaac
tatttaagtgccagaggccggaaacgctttgaggtttatgtttgtacgatggctgaacga
gaatacgctctagaaatgtggaggattcttgatccagactcaaatttgataagtagtagc
gaactactggatcgtattgtcagtgtcaagtctggatcaaagaagtcattgtttaatgtt
ttccatggaggaatttgtcatcccaaaatggctttggtcattgatgatcgtctagaggtg
tgggatgagaaagatcagcctcgtgtccatgtggttccctcatttgctccttattatgct
ccccaagctgaggcgaacaataccatccaagttctgtctgtggctagaaatatagcatgc
aatgtccgtggtggttttttcaaagattttgatgagagtctgttgcaacggacttctgag
gttttgttcgaagatgatcctaaagatatcactttgccacctgatgtgagcaattatttg
gtagcagagaataagggctttggttttaatggaaatgaagaattaacttgtttcaatggg
atggcggatgtggagcttaaaagaaggcttaaggaagcagcaatatcagcgtcatttcct
tctgtaacttcttcaaataccgtcaattttgatactagattgacatcatctcttccgttc
gctgttactactcccatgataacaccacagcctacacatcaagcgtcaattactcctctc
cgttctaatctgttctcacaagaagggcctttaggtagatcattgggtaacatcggtcct
ctggacataggtctgcagaattcccccgtgtgcaaagaaggtgaaatacctgaatctgag
cttgatcctgatacacggaggcggcttctcattttgcagcatgggaaagatacgagagaa
aacataccgagtaagcctccattttcagtaagacccacagttcaagcacccgttgcaggc
cccagtcccggcccagcttcattccatggttctgttctaggtcctgtttcttgggtgcaa
tcacgtggaaactggttttcaaatgaggagcacacgagcacaggtcgtctgagtcgacta
ggaactacagagtttcctatacctcctgatgtacttattgagaagcagcgtctacctgtc
tctaatcctcggaaagtggacagttcagactggtctgatcgtacttctattgaaaaacaa
agacttcccagagaggcttctcgcagagatgataaattgcggtcaaactattcactgtgt
aactatcagtcatttcaaggtaacaatggaagtactttgagccgatttgcttcgagaaac
aagggttttgaagttgagtctgaacgaagcagttcattatctcggatttttttaggtgct
ttacatgacattgcaatgaagtgcaaaacaaaggttgagtttaagtcaggattggttgct
tcccaggagttgaagttctctatggaggcttatttttcaggagaaaaaattggtgaagga
actggtctacgcagaagggaagcccagcagcgtgcagcagaggctgctatgattaatttg
gccgaaagatatttggtttactcaaattctgatactaacgcaccacaaagtgatactagt
aggggtcagagtgcaagtgatgtaagatttgtaagcgacacgaattctcatgttgattgc
ccttcaagaataaaagagacggtagcgccttcatctgagcccaccaggctagatgattct
catgtagatggttctaagaactccgtgggttcaacttccgttctgaaagaattgtgcaca
agagaagacctcactgttaattctaaagatcagtctccgacttcaactaatccagttgtt
ttagatcaaatacatgccgaggtggaagtaaatgggcaagttgttgggatgggcattgga
tcgtcatcggacgaggcaaacctgcaggctgctgagccggctcttgcaagtcttaaatcc
atgctgggtcattttactaaacgtccaagatcttcgcgttcggtagaaggaatgcccaat
aaacgcttgaagcagagtatttgcagggtgtag
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