KEGG   Amaranthus tricolor (tampala): 130814500
Entry
130814500         CDS       T09367                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03010  Ribosome
atri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    130814500
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130814500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:atri03011]
    130814500
   04121 Ubiquitin system [BR:atri04121]
    130814500
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atri04147]
    130814500
Ribosome [BR:atri03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    130814500
  Archaea
    130814500
Ubiquitin system [BR:atri04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   130814500
Exosome [BR:atri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130814500
  Exosomal proteins of colorectal cancer cells
   130814500
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Fer2_3 Thioredox_PDIA6_C OTU1_UBXL Ubiquitin_5
Other DBs
NCBI-GeneID: 130814500
NCBI-ProteinID: XP_057536570
LinkDB
Position
6:25785526..25786313
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE
CPNGECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacagggaaaaccataaccctagaggttgaatcctct
gacaccatcgacaatgtcaagaccaagatccaagacaaggaaggaattccaccagaccaa
caacgtctcattttcgccggaaaacaacttgaagatggccgtactctagccgattacaac
atccagaaggaatcgactcttcatttggtgcttcgattgaggggtggtgcgaagaagaga
aagaagaagacttacactaagccaaagaagatcaagcacaagcatagaaaggtaaagctt
gctgttcttcaattttataaggttgatgattctggcaaggtccagcgtttgaggaaggaa
tgccctaatggtgagtgtggtgctggtactttcatggctaatcattttgatcgtcattat
tgtggtaagtgcggtcttacctatgtttaccagaaggctggcggtgattaa

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