Amaranthus tricolor (tampala): 130814710
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Entry
130814710 CDS
T09367
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like isoform X1
KO
K27629
cyclic nucleotide gated channel 17
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04075
Plant hormone signal transduction
atri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130814710
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130814710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atri04040
]
130814710
Ion channels [BR:
atri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130814710
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF4231
UBM
Motif
Other DBs
NCBI-GeneID:
130814710
NCBI-ProteinID:
XP_057536845
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Position
6:complement(21090643..21100292)
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AA seq
732 aa
AA seq
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MCECIFWNNWSGFSSLGMELKKDKIVRFYSGGKKNPDIVLPKVDPTRLEKSSSTYKPSLI
YFNGDGTLGTSGRLGEPFKWGKAKVLLEGKQSWRNRILDPGSEIVLKWNKVFIVSCLLAL
FVDPLYFYLPGISGDKKRFCVKTDLHLQIVVTLWRTVADLFYLLHLIIKFRTAYVAPSSR
VFGRGELVRDPNMIARRYIKSDFFIDLIATLPLPQFVIWFIIPASRSPRTDHNNNALALI
VLLQYIPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYILASHVLGAAWYLLSIERY
THCWKSNCRQEKGPPKCVLHFLDCDIFNSPARVAWANTTSVFSNCDPKQSSIPYGIFEDA
VKKSVVSTNFIRKYFYCLWWGLQQLSSYGQNLDTTTFIGETSFAILIAIVGLVLFAHLIG
NMQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPEDLKHRVRRFVHSKWLATRGVDEESIL
TSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYIVREGDPVT
EMLFIIRGRLESSTTNGGRTGFFNSITLKPGDFCGEELLGWALHPKSSLNLPSSTRTVRA
LVEVESFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRSKRRKM
TKFLSSLESFSSERDDDETREEVDSPSTPRVKPTLAVTLLASKFAANTRRGAQKIKLQKP
EEPDFSVDPDDD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaatgcattttctggaataattggagtggttttagctcacttggcatggagttg
aagaaggacaaaattgtaaggttttattctggtgggaaaaagaaccctgatattgtactg
ccaaaagtggaccctacaagattagagaagtcatcttctacttataagccttcattaatt
tactttaatggtgatggaactttagggactagtggtagattaggagaaccatttaagtgg
ggtaaggctaaggttttgttggaagggaaacaatcatggagaaataggatactagatcct
ggaagtgaaattgtgttgaaatggaataaggttttcattgtttcttgcttgctggcactt
ttcgtcgacccgttatacttctatctgcctggcataagtggggataagaagagattttgt
gtgaaaactgacttgcatttgcaaattgttgtcaccctttggcggacggttgcggatctc
ttttatctgttgcacttgatcatcaaatttagaacagcttatgtggctccgagttctcgg
gtgtttggaaggggtgagcttgtgagggatccaaatatgatagcgcggaggtacattaag
tctgatttcttcatcgatcttattgccacattgcctctgccccagtttgtaatctggttc
atcattcctgcatcaagaagtccaagaactgatcacaataacaatgctcttgcgctcatt
gtcctgcttcagtatattcctcgattatatctgattttccctttgagctctgaaatcata
aaggccactggagtagttacaaagactgcatgggcaggtgcagcatacaatctgctattg
tatatcttggctagccatgttctcggggcagcatggtatttgctatcaatcgaaaggtat
acacattgttggaagtccaactgtagacaagaaaaaggccctcctaaatgtgtgcttcat
tttttagattgtgatatcttcaacagtccagctcgtgtggcttgggctaataccacttct
gtattcagcaactgcgatccaaaacaaagtagcatcccatatggaatttttgaggatgca
gtgaagaaaagtgttgtttccaccaactttatccgaaagtacttctattgtttatggtgg
ggcttgcaacagctaagttcttatgggcaaaatctggatactaccacattcattggggag
acgtcatttgccatactaattgcaattgtgggtcttgtcttatttgcacatttgattggg
aatatgcagacatatcttcaatctatcactgtgaggcttgaagaatggaggctcaagcga
agagatactgaagagtggatgagacatcggcaactccctgaagatctgaaacatcgtgtc
cgacgctttgtacattctaagtggcttgcgactcgaggagttgatgaagaatctattttg
actagcttgcctactgacctacgcagagacattcaacgccacctttgcttggatcttgtt
cgaagggtgccttttttctcacagatggatgatcagctacttgatgcaatctgcgaacgc
ctcgtatcctcgttgtgcactgagggcacatatattgttcgagagggtgatcctgtgaca
gagatgcttttcatcattagagggagattagaaagttccacaacaaatgggggtcgaacg
ggtttttttaattcgataactttaaagcctggagacttttgtggtgaagagttgcttggt
tgggctctgcatcccaaatcttcccttaatcttccctcttcaaccagaactgtgagagcc
cttgttgaagtggaatcctttgcccttagagcagaagatctaaagtttgtcgccaatcaa
tttagacgacttcacagcaaaaaacttcagcatacattccggttttactctcatcattgg
aggacttgggctgcctgctttatacaggctgcttggcgacgatccaagagaagaaagatg
acaaaatttctttcctctttggagtccttctcttcggaaagagatgacgatgaaactaga
gaggaagtagattccccctcaactcctcgagtgaaaccaaccttagcagttacattgttg
gcttccaaatttgcagcaaataccagaagaggagctcagaagattaaattgcagaagcct
gaagagcctgatttttccgttgatcctgatgatgattga
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