KEGG   Amaranthus tricolor (tampala): 130814810
Entry
130814810         CDS       T09367                                 
Name
(RefSeq) RING-H2 finger protein ATL43
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130814810
Enzymes [BR:atri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130814810
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130814810
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 Prok-RING_1 Prok-RING_4 zf-RING_16 zf-RING-like RINGv zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 130814810
NCBI-ProteinID: XP_057537012
LinkDB
Position
6:19718171..19719849
AA seq 367 aa
MKIPSSLHHFSLLLTILLSSSSLTISRPISPSPENPPPNFSPFKPSIAVIIGALTTLFSL
TFLLLMYAKHCKQRPGSSLDPDSYYYNRSFPVPGRKNSGIDPLIIESLPVFRFGALRGEK
DGLECAVCLNRFEPAEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRFRVDPEDILLIDR
VKPDELGLGLSLPESTRRVSGRHSSALERGGGETKTKSQTTSSRRSLDGTIKAVDKRKDG
MLLTVDKEVRRVEHKIIIEGGPQERWSDFQPYDRLYLRSEMLMSEGRRSSTRVHGNNHGV
RTQEITNSGKNVINERSVSEITGLSRFTSRNTGGSGNEERGRERHDGAIARWMAWISQSK
TAVRPGA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaaaataccttcatcccttcaccatttttccctccttctaaccatcttactttcatct
tcttctcttactatttcccgcccaatttcaccctctccggaaaacccacctcctaacttc
tcacctttcaaacccagtatcgccgtcatcatcggtgctctcactactcttttttcactt
acttttctccttcttatgtacgctaaacactgtaaacagcgacccgggtcttccttagac
cccgattcctattactataatcggagtttccctgttcccggaagaaaaaactcgggtatt
gatccacttattattgaatcattacccgttttccggtttggcgcattaaggggtgaaaaa
gatgggttagagtgtgcagtttgtttaaaccggtttgaaccggcggagattctccggctt
ttgcctaaatgtaagcatgcttttcatgttgagtgtgttgacacgtggcttgatgctcat
tccacgtgtcctctctgccgatttcgggttgacccggaagatatccttcttatcgaccgg
gttaaaccggatgagttgggattgggtttgagcttacctgagtcaactcggcgagtctcg
ggtcgtcactcgtctgcactcgagcgaggcggtggggaaactaaaacgaaatcacaaacg
acgtcgtcaaggagatcattagacgggacaatcaaagccgttgataaaagaaaagatggg
atgttattaaccgtcgataaagaggttaggagagtagaacataaaattataatagaaggt
ggcccacaggagagatggagtgattttcagccgtacgataggctttacttacgatcagag
atgttgatgagcgaagggcgtcgatcatcaacgagagtgcacgggaataaccatggggtg
aggacacaggagatcactaatagtggcaaaaatgtaataaatgaaagaagtgtgtcggaa
atcacggggctaagcaggtttaccagcagaaatacaggaggtagtggaaatgaagagaga
ggaagggagagacatgatggggctattgccaggtggatggcctggatttcgcaatctaag
acagctgtacggccaggagcttaa

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