Amaranthus tricolor (tampala): 130814810
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Entry
130814810 CDS
T09367
Name
(RefSeq) RING-H2 finger protein ATL43
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130814810
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130814810
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130814810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_1
Prok-RING_4
zf-RING_16
zf-RING-like
RINGv
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
130814810
NCBI-ProteinID:
XP_057537012
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All DBs
Position
6:19718171..19719849
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AA seq
367 aa
AA seq
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MKIPSSLHHFSLLLTILLSSSSLTISRPISPSPENPPPNFSPFKPSIAVIIGALTTLFSL
TFLLLMYAKHCKQRPGSSLDPDSYYYNRSFPVPGRKNSGIDPLIIESLPVFRFGALRGEK
DGLECAVCLNRFEPAEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRFRVDPEDILLIDR
VKPDELGLGLSLPESTRRVSGRHSSALERGGGETKTKSQTTSSRRSLDGTIKAVDKRKDG
MLLTVDKEVRRVEHKIIIEGGPQERWSDFQPYDRLYLRSEMLMSEGRRSSTRVHGNNHGV
RTQEITNSGKNVINERSVSEITGLSRFTSRNTGGSGNEERGRERHDGAIARWMAWISQSK
TAVRPGA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccttcatcccttcaccatttttccctccttctaaccatcttactttcatct
tcttctcttactatttcccgcccaatttcaccctctccggaaaacccacctcctaacttc
tcacctttcaaacccagtatcgccgtcatcatcggtgctctcactactcttttttcactt
acttttctccttcttatgtacgctaaacactgtaaacagcgacccgggtcttccttagac
cccgattcctattactataatcggagtttccctgttcccggaagaaaaaactcgggtatt
gatccacttattattgaatcattacccgttttccggtttggcgcattaaggggtgaaaaa
gatgggttagagtgtgcagtttgtttaaaccggtttgaaccggcggagattctccggctt
ttgcctaaatgtaagcatgcttttcatgttgagtgtgttgacacgtggcttgatgctcat
tccacgtgtcctctctgccgatttcgggttgacccggaagatatccttcttatcgaccgg
gttaaaccggatgagttgggattgggtttgagcttacctgagtcaactcggcgagtctcg
ggtcgtcactcgtctgcactcgagcgaggcggtggggaaactaaaacgaaatcacaaacg
acgtcgtcaaggagatcattagacgggacaatcaaagccgttgataaaagaaaagatggg
atgttattaaccgtcgataaagaggttaggagagtagaacataaaattataatagaaggt
ggcccacaggagagatggagtgattttcagccgtacgataggctttacttacgatcagag
atgttgatgagcgaagggcgtcgatcatcaacgagagtgcacgggaataaccatggggtg
aggacacaggagatcactaatagtggcaaaaatgtaataaatgaaagaagtgtgtcggaa
atcacggggctaagcaggtttaccagcagaaatacaggaggtagtggaaatgaagagaga
ggaagggagagacatgatggggctattgccaggtggatggcctggatttcgcaatctaag
acagctgtacggccaggagcttaa
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