Amaranthus tricolor (tampala): 130814829
Help
Entry
130814829 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130814829
KO
K14794
ribosomal RNA-processing protein 12
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130814829
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
90S particles
Other 90S particles
130814829
Pre-60S particles
Other pre-60S particles
130814829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
TOR1L1_N
Tti2
HEAT_GCN1
ARM_TBCD
RAG1
Motif
Other DBs
NCBI-GeneID:
130814829
NCBI-ProteinID:
XP_057537036
LinkDB
All DBs
Position
6:21796528..21811660
Genome browser
AA seq
1270 aa
AA seq
DB search
MEMEGLELQDELLLEDDDFCTSILNQFSNSNDEQHLHLCSIIGAMSQELKDQNVTLSPIA
YFGSIVASLDRLSVSSSSSSNPNYTVNALLTLLSMIMPRISVGILRKKKLLLLELLVRVL
QRAESFLSDGVVSGLNCVSGLLVIRDSLNWLEIKQFYGFLLGFVTNSDSKVRRQSHTCIR
DILQSFQGTPLLVPASEGFTNMFEKSLLLAGESKGATAEKGAQEILHVLEALKDFLPYIS
MKYKTVILKYYKTLLGVRKPLVTRRITDSLNILCLDPSVEVKSEELVDLLSSLAVLVPME
ETSADGMTFTARLLDVGMRKVYNLNRQIAIDKLLLVLKALQDIFGSGFEEAKFAATEAMK
NLIQACVDEDLIKQGIDQVQNNSHLNNRKSAPSTIEKICATIGTLLDNRYCSEWDMAFQV
VSLMFDKLGEHSSVLLRSTLEGLANIEKESGEDFSERKQLHDCIGSALGAMGPEIFLRIL
PLKLEADNLSEINDWLFPILKQYVVGASLRFYVESFLGIIGNLKQKSHKLKLEGQVQSSR
YADRMVYQVWSLLPSFCNYPSDTAKSFKLLQKVLCNVLSEEPDLHGIVCSSLQILIQQNK
CIVEGKNYLPSDKLNLSTERAISRYSEEVASTNLNVLKSSASDFLSVLSKVFLKSTNDPG
GSLQTSIGEFASIAGQDVVSSLFKNKMRRLLKVTMSANQAENSSNSMQIDTSVNSNSLSR
ERAQLFDLAVSLLPGLGPQETDVLFTAIIPALKDVDGLIQKKAYKVLSIILKNSDGFISR
KLEELLKLMIEVLPSCHFSAKRHRLHCLYFLIVHVAEDGAEHKRGEIISSFLTEIVLALK
EVNKKTRNKAYDILVQIGHACGDEESGGKKENLLQFFNLIAGGLAGETPHMISAAVKGLA
RLAYEFSDLLSSAYSVLPSSFLLLQRKNREIVKANLGLLKVLVAKSQAEILQNHLKLLVE
GLLKWQDDTKNHFKAKVKNLLEMLVKKCGIDSVKAVMPEEHMKLLTNIRKIKERRERKIA
ANSETRSYHSKATMSRQSEWGHTKIFSDFDEETSDGDDMDAETSFGRRSKLSSKLNSKAP
SLRSKKTRSARTLLEDSLDQLENEPLDLLDQQKTRLALRSGGNLKRKHDSDDEPEFDEDG
RLVVHEGGRPKKDKSYDHESDEDKSEIRSYASTNSKKAQKRRKTSDSGWAYTGKEYASKK
ARGDVKKKGKLEPYAYWPLDRKMLSRRPEHRAAARKGMSSVVKLTKKLEGRSVASALSVR
SKMKKAHKKK
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaaggtcttgaattgcaagatgaattacttctcgaagacgacgatttctgc
acttcaatcctcaatcaattcagcaattccaatgacgaacagcatctccatctttgttcc
attatcggcgcaatgtcacaagaactcaaagaccaaaacgttactctttctcctattgct
tattttggttccattgttgcttcccttgatcgtctttctgtctcctcttcttcttcttcg
aaccctaactatactgttaatgcgcttctcactttgctttctatgattatgccgagaatc
tcggttgggattttgaggaagaagaagttgttattgctggagttattggttagggttcta
cagcgtgctgaatcttttttgtctgatggtgttgtatcgggtttgaattgcgtttcggga
ttgttggtaattagagactctttgaattggttggagattaagcagttttatggatttctt
cttggttttgtcactaattcggattctaaggtgaggaggcaatcacatacttgtattcga
gatattttgcaaagctttcagggaacaccattgttggtacctgcaagtgaagggtttacg
aacatgtttgagaaatcgctacttcttgctggagaatcaaaaggtgctactgctgagaaa
ggagctcaggagatcttgcatgtccttgaagctcttaaagattttcttccctatatctca
atgaaatacaagactgtcattttgaagtactacaaaacccttttgggtgtacgtaagccc
cttgtcacaaggcgtataacagatagtttgaatatcctttgccttgaccctagcgtggaa
gttaaatctgaagagctggtagatctattaagctctttagctgttttagttcctatggag
gagacatcagctgatggcatgacctttacagctcgtctcttggatgttggaatgaggaaa
gtttataatctcaatagacaaattgccattgataaacttctccttgttcttaaggctttg
caagatatttttggatctggattcgaagaagctaaatttgctgcaactgaggcaatgaag
aaccttatccaagcttgtgttgatgaagacctcataaaacaaggcattgaccaagtacaa
aataattcacacctcaacaatcggaaatctgcaccgtctactattgagaaaatatgtgcc
actattgggacattgctggacaatagatattgtagtgagtgggatatggcctttcaggtt
gtctctttgatgtttgacaaattaggtgaacattcttctgtccttttaaggagcaccttg
gagggcttggcaaacattgaaaaggaaagtggcgaagatttctcagagaggaaacagctg
catgattgcattggatcagctcttggagcaatggggcctgaaatatttttgagaattctt
ccactgaaattggaagctgataatttatccgagataaatgattggctttttccaattcta
aaacagtatgttgtgggtgcaagtttgaggttctatgttgagtcttttctgggtattatt
ggaaatcttaaacagaaatctcacaagcttaaacttgaggggcaagttcagtcatcaaga
tatgctgacaggatggtgtaccaagtctggtccttgttgccttcattttgcaactatcca
tcggacactgctaaaagcttcaaacttcttcagaaagtattgtgcaatgttctgagtgaa
gaacctgatcttcatggaattgtttgttccagtttgcaaatcctcattcagcaaaacaag
tgcattgttgaaggaaaaaattatttacccagtgataaattaaatctttccaccgagaga
gcaatttctcgttatagtgaagaggtagcttctactaatttgaatgtgctcaagtcttct
gccagtgattttttgtcagttttatccaaagttttcctgaaatctacaaacgatcctgga
ggaagtttgcagactagtattggtgaatttgcttcgatagcaggccaggatgtcgtctca
agtttatttaagaataaaatgagacgacttttgaaggttaccatgagtgctaatcaagca
gagaacagtagtaattcgatgcagattgacacttcagtcaattctaattcgctttctcgt
gagagagcgcagctttttgatttggcagtttcacttttgcctggtttggggcctcaggag
actgatgtcctttttactgcaataattccagcattaaaggatgtagatggcttgatccaa
aagaaagcttacaaagttctttcaataatcctcaagaattctgatggttttatttcaaga
aagcttgaagagcttctgaagttgatgatcgaagtgctgccttcatgccatttctcagct
aaacgtcataggcttcactgcttgtatttccttattgtccatgtggccgaggacggagca
gagcataaaaggggtgaaattatcagttcattcttaacagaaattgtacttgctctgaag
gaggtaaacaagaaaaccagaaataaggcttatgatattcttgtccaaattggtcatgct
tgcggagacgaggagagcggtgggaaaaaagagaacttacttcagttcttcaatttgata
gctggaggccttgctggtgagactcctcatatgatcagtgctgctgtgaaaggattggct
cggttggcttatgaattctctgatcttctttctagtgcatacagtgtgcttccctcttca
tttcttcttctacaaaggaagaatagagaaatcgttaaggccaatttaggtctacttaag
gttttagttgcaaaatcacaagctgagatcctgcaaaaccacctgaaacttctagttgaa
ggccttctgaagtggcaggatgatactaagaatcatttcaaagctaaggttaaaaatctt
ttggagatgcttgttaagaaatgtggcattgactctgttaaggctgtaatgcctgaagaa
cacatgaaactcctcactaatatccgtaagataaaggaacggagagagaggaaaattgca
gccaattccgagacgagatcctatcattcaaaagcaaccatgtccagacaaagtgaatgg
ggtcacacaaagatattctcagactttgatgaagaaacaagtgatggagatgacatggat
gcagagacatcttttggtcgaaggagcaaattatcttcaaagttaaattctaaagcacct
tccttaaggtcaaagaaaacaaggtctgcaagaaccttattggaagactctcttgatcag
ttagaaaatgaacctcttgatcttctagatcagcaaaaaaccaggttagcccttcgttca
ggcgggaatttaaaaaggaagcatgattcagatgacgagccagaattcgatgaagatgga
agactagtagtgcatgaaggaggaagaccaaagaaagacaaatcgtatgatcatgaatct
gatgaagataaatccgaaatccgtagttatgcctctacaaactcaaagaaagcccagaag
cgcagaaaaacatccgattctggttgggcttatacaggaaaggaatatgctagtaagaag
gctcgtggggatgtgaaaaagaagggaaaacttgagccatatgcatactggcctttagat
cgtaaaatgctgagccgtagacctgagcatcgagctgctgcaagaaagggtatgtctagt
gtggtaaagttgacaaagaagcttgaaggaaggagtgtcgcgagtgcactttctgtgagg
agcaagatgaaaaaggctcacaaaaagaaataa
DBGET
integrated database retrieval system
