Amaranthus tricolor (tampala): 130814833
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Entry
130814833 CDS
T09367
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130814833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130814833
03029 Mitochondrial biogenesis [BR:
atri03029
]
130814833
Membrane trafficking [BR:
atri04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
130814833
Mitophagy
Scaffold proteins
130814833
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130814833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
FliD_C
DUF4355
PKcGMP_CC
DUF294_C
IKKbetaNEMObind
DUF5945
Motif
Other DBs
NCBI-GeneID:
130814833
NCBI-ProteinID:
XP_057537043
LinkDB
All DBs
Position
6:22557658..22569752
Genome browser
AA seq
1138 aa
AA seq
DB search
MSSNVTGGYICRGKLLIHIAENGHSYELDCDDSTVVESVQRFIESMAGIQFSDQLLLCGD
MKLESNEVLGAYKLPSDEQEVFCFNKARLQANAIPPSPEQIEIHVVPEPTPSTSNHDPHP
LDNAVDPALKALPSYERQFRYHYHCGHAIYTRTMEKIEICERLLSEQKVQERAIEIARHN
LDYFFRILNQNYMDFLKCYSQQHRVHSDLLLNFNRYIEKLRSCMIIPALQTSTRKCLLDL
VKEENLAKWVENCTCSHKQFENKVSQFKHVFGKLRHDVEHLFSSKASLPIRDLEMMIKEH
YCHINEQKSIMLSLSKDVSTVKKLVDDCLSSQLSSSLRPHDAVSALGPMYDVHDKNHLPK
MTACDSSISDLLDYCTNKKNDMNMFVHNYMQKIAYIQHTIKDVRLQFNAFSEAVKRQDAV
FEGLKVVRGIGPAYRACLAEIVRRKASMKLYMGMAGQLAEKLATKREEEVRRREEFLKSQ
SPYIPRDILAAMGLFDTPSQCDVNIVPFDTSLLDIDIRDIECYAPESLVGLPFKSEKAGT
SRTSLSISTNSFPLDVEGNAASTPEGHESQDLFDVCDLVDIAGTSKMEVENAKLRADLAS
AIARMCSFSSDVDHESIDDSKVDSLLKDAVDKTNEALLQKDEYIKHLESMLKTRQKQCQS
YEKRIEELAQQLSEQYMQARKCLGNNDAAFSKADDCRSEILDQVERQLACRPSDLMDEIS
CTSNVADSKDELLPRMSRKSQEVDENMTDSSGMQNPQLDSSMMDPQRDEQLLEAKVENKM
LGQLSATSPCDVATGSSDVLPSKASSDPSLNAAKANAELVLELQIALENKANQLTETESR
LTSALDDISRLGLELENSRKLLDESQMNCAHLENCLHEARQEAQTHLCAADRRASEYNKL
RASAVKMRGLFERLRSCVNASGGVAGFADALNSLAQSLASSASDVEDDGTAEFRTCIRVL
ADKVGILSRQRTELLDRSSKAEAASKQLSKDLEERKELVKTLYTKHQLEKQANKEKISFC
RFEVHEIAAFILNSWGQYEAISRNCPNYFLSPESVALFTDHLPIRPAYIIGQIVHIERCI
VKPRPGVSRPEHNIGGHQSDCITSSSDTIASRLPVGCEYFIVTVAMLPDTTIHSSLPS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgaatgtcactggtgggtacatatgtagagggaagctgttgattcacattgct
gaaaatggacattcatatgagctggattgtgatgattcgactgttgtcgagtcagttcaa
aggtttattgagtcaatggctggaattcaattcagtgatcagcttcttttatgtggggat
atgaagctcgagtctaatgaggtgcttggggcttataaactaccatctgatgaacaagaa
gtattctgtttcaataaggcgcgattgcaagcaaatgctatacctccttctcctgaacaa
attgaaattcatgtcgttcctgaaccgacaccatcaacttcaaaccatgatcctcacccg
ttggataatgctgtggatcctgcacttaaggcattaccatcctatgaaagacagtttcga
tatcattatcattgtggtcatgccatatacaccaggactatggagaaaattgaaatttgt
gagaggcttttgagtgagcagaaagtgcaggaaagggcaatagagattgcccggcataat
ttggattacttttttagaatattaaatcaaaattatatggattttcttaagtgttattct
caacagcatcgtgtacattctgatttgttgttgaattttaatcgttacattgaaaagtta
aggtcttgtatgattatcccagctctacaaacatccactcgaaaatgtttgttggatctg
gtaaaagaagaaaacttggcgaaatgggttgagaattgtacttgttctcacaaacaattt
gagaacaaggtttcacaatttaagcatgtgtttggaaagctgaggcatgatgtcgaacat
ctattttcaagcaaagcttcattgccaatcagggatttagaaatgatgatcaaggaacat
tattgccacatcaatgaacagaagagtattatgctgtctttgagtaaggatgtcagcaca
gtgaagaaactggtagatgattgtttatcaagccagttgtcctcttctctccgtcctcat
gatgctgtttctgccttgggtcctatgtatgatgtccatgacaaaaatcatcttccgaaa
atgacagcctgtgatagttcaatttctgaccttcttgattattgcacaaataaaaagaac
gacatgaatatgtttgttcacaattacatgcaaaagattgcatatattcaacatactata
aaggatgttcgtttgcaatttaatgctttctcggaagcagtaaaacggcaggacgctgta
tttgagggcttaaaggtggttcgtggaattggccccgcttatagggcatgtcttgcagaa
atagtgagaagaaaggcttcgatgaagctttacatgggcatggcaggacaattggctgaa
aaacttgctacaaagagggaagaggaggtgaggagacgagaggaatttttgaaatcacaa
agcccatatataccaagggatatattagctgccatgggattatttgatacgcccagtcaa
tgtgatgtcaatatagttccttttgacactagcttgcttgacattgacattagggatatt
gagtgttatgctcccgagtctttggttggattaccattcaagagtgagaaagcaggaact
tcaaggacctcactttctatatctacaaatagttttccattagatgttgaaggaaatgct
gcttctacccctgaagggcacgagtctcaggacctctttgatgtctgtgacttggtagac
attgctggaactagtaaaatggaggttgaaaatgcaaaactgagagctgaccttgcttct
gcaatcgcgcgtatgtgctcattcagctctgatgtggatcatgaatctattgatgatagt
aaggtagatagtttgctaaaagacgctgtggacaaaactaatgaagcactgctacagaag
gatgagtacataaagcatcttgagtcaatgttgaagaccagacaaaagcagtgtcaatcc
tatgaaaagcgcatcgaagagttggctcagcaattatctgagcaatatatgcaggcaagg
aagtgtttgggcaataatgatgctgctttctcaaaggcagatgattgcaggtctgaaatt
ctggatcaagtggaaagacaactagcttgtcgacctagtgatctcatggatgagatttct
tgtacatctaacgtggctgattcaaaggatgaactattgcctaggatgagtagaaaatcc
caagaagtagatgagaacatgactgactcttctggaatgcagaatcctcaattagactca
tctatgatggatccgcaacgtgatgagcagctgcttgaagctaaagttgagaataagatg
ctcgggcagctaagtgctacgtcaccttgtgacgttgccacaggttcttcagatgtcttg
ccttctaaggcttcttctgacccaagtctgaatgctgcaaaggccaatgctgagcttgtg
ctggaactgcaaattgcacttgaaaataaagcaaaccagctgactgaaactgaaagtagg
cttacatctgcgttggatgatatttctaggcttggcttagagttagaaaatagcaggaag
ctgctagatgaatcacagatgaattgtgctcatcttgagaactgtctgcatgaagctagg
caagaagctcaaacccacctttgtgctgctgacaggagagcttcagaatacaacaaatta
cgtgcatctgctgtgaaaatgcgtggcctttttgaaagacttaggtcctgtgtcaatgct
tctgggggagttgctggttttgctgatgcgcttaattccttagctcaatctcttgccagt
tctgctagcgacgttgaagatgatggtactgctgagtttcgtacatgtatcagagtcctc
gctgataaagttggtattttatcaaggcaacgcacggagctgcttgataggagttcaaag
gctgaagctgcaagcaagcaactttcaaaggatttggaagagaggaaagaattagtcaaa
acattatacacaaagcatcaacttgagaaacaggcaaataaggaaaagatctccttttgc
cgttttgaggtccacgagattgcagccttcatcctgaattcatgggggcagtatgaggca
ataagccggaactgcccaaactatttcctctcaccagaatctgtggccttattcacggac
catcttccaattcgccctgcctatatcatcgggcagattgtccacatcgaacgatgtatt
gtgaaaccccgacctggagtgtcgaggcctgagcacaacattggagggcatcagtctgat
tgcataacatcatcatccgacaccattgccagccgtcttcctgttggatgtgaatacttc
atcgtaacagttgctatgctacccgatacaactattcattcgtcgctgccttcctga
DBGET
integrated database retrieval system
