Amaranthus tricolor (tampala): 130814899
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Entry
130814899 CDS
T09367
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130814899
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130814899
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130814899
Protein phosphatases and associated proteins [BR:
atri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130814899
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Pre-60S particles
Helicases
130814899
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Crystall_4
bCoV_NSP1
Ig_NUP210_6th
MEDS
Motif
Other DBs
NCBI-GeneID:
130814899
NCBI-ProteinID:
XP_057537143
LinkDB
All DBs
Position
6:21852529..21863510
Genome browser
AA seq
595 aa
AA seq
DB search
MKKPAHQNQNQNQNQKTDDDIFASCTFASLGLQPSLCDQLRERLGFETPTQVQAQAIPVI
LSGHHVLVNAATGTGKTVAYLAPIIHHLHKYAPRIQRVDGTFALVLVPTRELCMQVYEIL
QKLLHRFHWIVPGYIMGGENRSKEKARLRKGITILVATPGRLLDHLKNTSSFLHTNLRWL
IFDEADRILELGFGKEIEEILDYFGSRKHNLSCEESGGSKISDFQRQNLLFSATLNEKVN
HLAKISLENPVMIGLAERKVQKNSSSKHFGSVGSEEVDEAEHCVRVVDSSSGDYNLPSQL
IQRYVKVTCGSRLAVLLSILKNLFEREPTQKVVVFFSSCDAVDFHYTLLKEFQWPQKENK
EKQLFMNCKTFRLHGNMEHEERKTTYHAIKTEKSALLLSSDVSARGLDFPKVRYIIQYDS
PGEATEYVHRVGRTARLGQKGDSLLFLQPIETDYLQDLKKHGVSLTEYPLQKVLDSFPLY
GQKHLAKKFISVEMHPWLVALQKALEAFISAEAKLNKMAKAAFVSWVRAYTAHKAELKRI
FTVKKLHLGHVAKSFALKDQPSLVGKSVHKQIKKRKKNEQKQTRQSKKRRVTINT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacctgctcatcaaaatcaaaatcaaaatcaaaatcaaaaaacagacgacgac
attttcgcatcatgcacctttgcaagtcttggtcttcaaccttccttatgcgaccaactt
cgagagagattaggttttgaaactccaacacaagttcaagctcaagcaattcctgttatc
ttatctggccaccatgtacttgttaatgctgcaactgggactggtaaaactgttgcttat
ttggctccaattattcatcacttgcacaagtatgcgcctcgaattcagagagtggatgga
acttttgcattggtacttgtaccaacgcgtgaattatgcatgcaggtttatgaaatttta
caaaagctgctgcaccgatttcattggattgttccaggatacataatggggggtgagaat
aggtcaaaagaaaaggcgaggttgcggaaaggtataactatacttgttgcaactcctggc
cgtcttttggatcacttaaagaacacatcatcattcttgcatacaaatttgcgttggttg
atttttgatgaagcagataggatattggaattgggatttggtaaagaaatcgaagagata
cttgattatttcggctcaaggaagcacaacttaagctgtgaagaaagtggtggttctaaa
atttctgactttcaaaggcaaaatctgcttttttcagctaccttaaatgagaaggtcaac
catcttgcaaaaattagtctagaaaatccagttatgattggtcttgctgaaaggaaggtc
caaaaaaattcatcttccaagcattttggctcggtaggatctgaggaggtagatgaggca
gagcactgtgtgagagttgtagactcttcaagtggagattacaacctcccatctcaacta
attcagagatatgtcaaagtgacctgtggttcacggcttgcagttcttctttctattctc
aagaatcttttcgaaagagaacctacccaaaaggtcgttgtcttcttttcatcttgtgat
gctgtggacttccattatacacttttaaaggagtttcagtggccacagaaagaaaacaaa
gagaaacagctttttatgaactgcaaaactttccgcttacatgggaacatggagcatgag
gagcgaaaaactacatatcatgccatcaaaacagaaaaatctgcgcttcttttatcaagt
gatgtttctgcgagagggttagacttccctaaagttagatatatcatacaatatgattcc
ccaggagaggcgactgaatatgttcatagggttggtagaacagctcgcttgggccagaag
ggagattcattattatttctacaacccattgaaacggactatttgcaagatttgaaaaag
cacggtgtatcgctaacagagtatccacttcaaaaagtgttggacagtttcccattatat
ggtcagaagcacctcgcaaaaaagtttatttcagttgagatgcatccttggttagtggct
ctacagaaggctctggaggcatttatatctgctgaggcaaagctgaataagatggcaaaa
gccgcgtttgtttcttgggttcgagcatatacagcacataaagcagagttaaaacggata
ttcacggtgaagaaactccatctgggtcatgtcgctaaaagttttgctctgaaagaccag
ccctctttggtagggaagtcagtacacaagcagataaaaaagaggaaaaagaatgagcag
aagcaaacaagacagtcgaagaagcgacgggtcactattaacacataa
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