Amaranthus tricolor (tampala): 130814958
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Entry
130814958 CDS
T09367
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130814958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130814958
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
130814958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
130814958
NCBI-ProteinID:
XP_057537242
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All DBs
Position
6:27685181..27695615
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AA seq
547 aa
AA seq
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MSFDLILKPTCGGCGSTSDLYGSNCKHLTLCCNCGKAMAENRAKCYECGAVVTRLIREYN
VRASSTNDKNYFIGRFPTGLPNFSKKKSAENQWTLQKEGLQGRQITDTLKEKYKNKPWML
EDETGQSQYQGHMEGAQSATYYLLMMQAKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKLFDGYERWMMKTASNGTAAFPTFDPNLVKEVPAAGGAKGRKKSTTEEDGNASDKA
EDDAEEEAERKARLGLNKNSGDDDEDEGRAGGIFDDEDDNIEKGDDWEHEEIFTDDDEAV
GNDREEREDLLAPELPAPPEIKQDDEDDDADEEEGGLSKSGRELKKLLGRANGLNDSDPD
EEDDSSAKKKKDEEDDDDEDEEDRPSPVLAPKLKDPKEEQADYSPAKAATGGSSRVTPAS
KSAKGKRKNGDDTKSSSAPQKKVKTENDVKSTTKEAVSKNGGAKATPSSSSKAGTSSQST
PAQGPVSEEEIRAVLLAKAPVTTNDLVGNFKARLKTPEDKKAFAEILKRISKIQKSNNKN
YVVLRGR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatttgatattgaaacctacatgcggtgggtgcgggtcaacgagtgatctc
tatggcagcaattgcaaacatctaacgctttgctgtaactgcggcaaagccatggcggaa
aatcgtgctaaatgctacgagtgtggcgctgttgtcactcgattaattcgtgagtataat
gttagagcgagctcgaccaatgacaagaattacttcataggcagatttcctaccggtttg
ccaaatttctcgaagaagaagagtgcggaaaatcaatggactttgcagaaagaagggctt
caaggtcgccagattaccgatactttaaaggagaagtacaagaataagccttggatgctg
gaagatgaaactggccagtcacagtaccagggtcatatggaaggtgcacaatcagccaca
tattatctattaatgatgcaggctaaagagtttgttgctataccagccggttcttggtac
aattttaataaggtggcacagtataagcaacttacgttagaagaagcagaggagaaaatg
aaaaataggagaaaattatttgatggttatgaaagatggatgatgaaaaccgctagcaat
gggactgctgcattccctacctttgacccaaatcttgtcaaagaagttcctgctgctggt
ggagcaaaagggcgcaaaaaatcaacaactgaagaggacggtaatgcctcagacaaggca
gaggatgacgcagaagaggaggcagaaagaaaggcaagacttggacttaacaaaaattca
ggtgatgatgatgaagatgaaggtcgagcaggaggtatttttgatgacgaagatgacaac
atagagaaaggtgatgactgggagcatgaggaaattttcactgatgatgatgaagctgtt
ggtaatgatcgcgaggagcgggaagatctactagctcctgaacttccagcacccccagag
ataaagcaggatgatgaagatgatgatgctgacgaggaggaggggggactgagcaaatca
ggaagagagctgaaaaaattgcttggaagagctaatgggcttaatgattctgatccagat
gaggaggatgacagctcggccaaaaagaagaaagatgaagaggatgatgatgatgaagat
gaggaagatcgcccttcacccgttctagctccaaagttgaaggaccctaaagaagaacaa
gctgattacagccctgcgaaagctgctactggaggatcttctagggtaactccagcatct
aaatctgccaaaggaaaaaggaaaaacggcgatgatacaaagtcttctagtgctcctcaa
aagaaggtcaagactgaaaatgatgttaaatctaccacaaaagaagctgtatccaaaaat
ggtggtgcaaaagctacaccttcatcatcctcaaaggctggtacatcttctcaaagtacc
cctgctcaggggcctgtttctgaagaggaaataagagctgtgttgctggcaaaagcacca
gtaaccaccaatgatcttgtgggcaattttaaagctagactaaagacaccagaggacaag
aaggcgtttgcagaaattttgaagaggatatctaagatacagaagagtaataacaagaat
tacgtcgttttaaggggaagataa
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integrated database retrieval system
