Amaranthus tricolor (tampala): 130815011
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Entry
130815011 CDS
T09367
Name
(RefSeq) CSC1-like protein ERD4
KO
K21989
calcium permeable stress-gated cation channel
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atri02000
]
130815011
Transporters [BR:
atri02000
]
Other transporters
Pores ion channels [TC:
1
]
130815011
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
130815011
NCBI-ProteinID:
XP_057537314
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Position
6:complement(25286985..25293750)
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AA seq
709 aa
AA seq
DB search
MDFSSFVTSVITSFLIFVVLMLIFAWLSRKPGNQVIYYPNRILKGLEIGSGSRNPISWIK
EAISSKEDEIIAVSGVDTAVYFVYLSTALTMLVLAGIVLLPALLPIAATDHSVKLNSTNP
NETTMAELDQFSMGHVGQNSPRLWAFLAAVYWVSLVTYYLLWKAYKHVSVIRATALKSPE
VRSEQFAILVRDIPSLLEGETRKEQVDAYFKDIYPDTFYRSMVVTDNKEVNKIWEELEGY
RKKLVRAEAVFAKSKTIGNTEGVRPTNRIGFLGLYGKKVDTIEYCNEKINELTPKLETVQ
QATLRDRQLSSALVFFSSRVTAASAAQSIHAPMIDTWTVEDAPEPRQLIWSNLSLNYYAR
EVRKYVVYVIVALTISFFMIPIGILSAFTTLQNLTKILPFIKPVVEIPAIRTVLEAYLPQ
LALIIFLAMLPKVLMLLSKVEGISSESHAVRAASGKYFYFIVLNVFIGVTLGGTLCGNFK
DMKKNPGEIPNILGRGLPKNATFFLTFVALKFFVGYGLELSRLVPLIIFHLKKKYLCKTK
SEVDAAWAPGDFGYATRFPGDMLILTITLCYSVIAPLIIPFGALYFGLGWLVMRNQALKV
YVPSFESYGRMWPHMHKRFLAALVLYQITMLGYFGVKEFPYAALIIPLPIISLIFAFVCN
KKFYGFFQHTALEVASCKLKETPNYERVYQSFFPPSLGSDKLDVEYGDV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagttcgtttgtgacgtctgtgattacttcttttcttatatttgtggttttg
atgttgatattcgcttggctttcgagaaaacccggaaaccaagtgatttactatccgaat
cggattcttaagggtttagaaatcgggtcgggaagccggaacccgatttcttggattaaa
gaagctatttcttccaaagaagatgagattatcgctgtttctggtgttgatactgccgtt
tatttcgtctatctttccactgctctcacaatgctagttttggctggcattgtgctactt
ccagctttattgcccattgccgccactgatcacagtgtcaaattaaatagcaccaacccc
aatgaaacaactatggctgagctagatcagttctccatggggcatgttggacaaaacagt
ccaagattatgggcgtttttagcagctgtctactgggtttctctggttacatattatctc
ttgtggaaagcatataaacatgtttctgtaataagggctacagctcttaaatctcctgaa
gtgagatcagaacaatttgcaatacttgttagagatataccctctctgttggaaggcgag
accaggaaggaacaagttgatgcatatttcaaggacatttatccagataccttctacagg
tcaatggtagtaacagacaataaggaggtgaacaagatttgggaagagttggagggatac
cggaagaaacttgtgcgtgctgaagcagtatttgcgaagtcaaaaacaattggtaacacc
gagggagttagacccacgaaccgcattggcttccttggactctacgggaagaaggtagat
accatagagtactgcaatgagaagataaatgaacttacaccaaagttagaaacagtgcaa
caagcgaccttaagagatcgtcaactttcttcagcacttgtattcttttcgagcagggtg
actgcagcttctgctgctcagagtatacatgctccaatgatcgatacttggacagtcgag
gatgctcctgaaccacgtcaactgatttggagtaacctttctctcaattattatgccaga
gaagtacgcaagtacgttgtctacgtcattgttgctttgacgatatctttcttcatgatt
cctattggaatcttgtctgcattcacaacattgcagaatctcacaaagattctacctttc
ataaaacctgttgtcgaaatacccgcaattcgaacagtgttggaagcttatcttcctcaa
cttgccctcatcatatttctggctatgctgcccaaagtactcatgttactttcgaaagtc
gaaggaatttcttcggaaagtcatgcagtaagggctgcttctgggaaatatttctacttc
attgttttgaatgtcttcattggagtaactcttggtggaaccctatgtggtaacttcaaa
gatatgaagaaaaacccaggtgaaattcccaatatacttgggaggggccttccgaaaaat
gcgaccttcttcttgacttttgtggctctcaagtttttcgtaggatatgggttggagttg
tctagattagttccgttgataatattccatttgaaaaagaaatatctctgcaagacgaaa
tctgaggtggatgcggcatgggctccaggagatttcggatatgcgaccaggtttcccggt
gacatgcttattctcacaattaccctctgctactctgtgattgcacctcttatcattccc
tttggtgctctctacttcggtctaggatggctcgtcatgaggaatcaggctctaaaagtc
tatgttccgtcatttgagagctacggaagaatgtggcctcatatgcataaaagatttctt
gctgcactagtcctttatcaaattaccatgcttggttactttggagtaaaggagttcccc
tatgctgccctaatcattccacttccgatcatttccttaatctttgcgttcgtgtgtaac
aagaaattctacggcttttttcaacacacggctcttgaagttgcaagttgtaaactgaag
gaaactccgaactatgaacgtgtttaccaatcattttttcctccaagtttgggttcagat
aagctagatgtggagtatggagatgtttag
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