Amaranthus tricolor (tampala): 130815075
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Entry
130815075 CDS
T09367
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130815075
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130815075
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130815075
Protein phosphatases and associated proteins [BR:
atri01009
]
HAD phosphatases
Fcp/Scp phosphatases
130815075
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130815075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
130815075
NCBI-ProteinID:
XP_057537396
LinkDB
All DBs
Position
6:complement(21589634..21609136)
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AA seq
822 aa
AA seq
DB search
MSKLGSSKLAVFNGETCLGELESIPIAKESKLQFPNNEIRIHHISQSNERCHPLSLLHTI
SPFSLLCKLEPSDQQQPQPNLLNLHASCFYELKTAVVLLNNEEIHLVAMPSKQKKFPCFW
VYAVPVGLYVSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIDALKGWISREIDPVRV
SGMNSELKRYVDDRALLKQYAENDCVVDGGKVFKAQFEEVTPLSDNYGTVVRPVVRLPDK
NLVLTRINPENRDTSVLVRLRPAWDELRSYLTAKGRKRFEVFVCTMAERDYALEMWRLLD
PEANLINSKQLLNRVVCVKSGSRKSLLHVFQDGICHPNMAMVIDDRLKVWEDKDQPRVHV
VPAFTPYYAPQAETANAVAVLCVARNVACNVRGGFFKEFDENLLRKIFELSYEDEMSNLP
SPPDVSNYLISEDSGFAPNGSASVPITEVISGADVDQKLSQLDEKLAMDSDTSSTTNIPD
LRSETPQQSIPSVQGVNPLRMTIPSQKGLLGVPARRDVRNPSGDPPILTLPAQTSERSWS
VEDANKGLLNSRGFVSAQEPDKSKADKQRSYSNSLGHSMTPSILSAQQHSRARVDEASPG
QEIPKQNLTASGTSGVAEISNSQNPAPSISKEAHVDALKVNTIPSGLSISVLQEIGRRCC
SKVEFKPILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAESALHFLAEKYLATCS
GLIDRDDKLPVQNENGFVWDDINLQSDELSSDEKLHRENVFEATELGPQSNFPMIINQLA
PKLGNSPRLQHSLSGKQSKEEPVRASQSSSSARQHRNGHPIL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattagggtcttccaaattggcggtttttaatggtgaaacatgtttaggagaa
ttggaatccatacccattgcaaaagaatctaaacttcaattccctaataatgaaattcga
attcatcatatttctcaatctaatgaacgttgtcatcctctctctcttcttcatactatc
tctcctttctctcttttatgtaaacttgagccttcggatcagcaacaaccacaacctaat
ctccttaacctccatgcatcttgtttctatgagcttaaaactgctgttgttttgcttaac
aatgaggagattcatcttgttgctatgcccagtaagcaaaaaaagtttccttgtttctgg
gtttatgctgttcctgttggactttatgtttcttgtttagggatgttgaatttgcgttgt
ttgtcaattgttttcgatcttgatgaaacccttattgttgctaatactatgaagtccttt
gaggatcggattgatgcccttaagggttggatttcaagggagattgatcctgttagggtt
tcgggaatgaattcagagttgaagaggtatgttgatgatagggcgttgctgaagcagtat
gctgaaaatgattgtgttgtggatggtgggaaggtgttcaaggctcaatttgaggaggtt
actccattgtctgataattatggaactgttgttcgccctgttgttcgcctgccggataag
aatcttgtgctgactcgaattaatcctgagaaccgtgatactagcgttcttgtgaggtta
cgacctgcttgggatgagttgagaagttacttgactgcaaagggacgcaaaagatttgaa
gtatttgtctgtaccatggctgagagagactatgctttggagatgtggaggcttcttgac
ccagaggcaaacctaataaattcaaagcaactcctgaaccgtgttgtctgtgtgaaatca
ggatcaagaaaatctctgctgcatgtatttcaagatggcatttgtcatcctaatatggca
atggtgattgatgaccggttgaaggtgtgggaggacaaggatcaaccacgtgtgcatgtg
gttcctgcattcaccccatattatgctccccaagctgagacagcaaatgctgttgccgtc
ttatgtgtagccagaaatgttgcttgcaatgtcagaggtggctttttcaaagaatttgat
gagaacttactgaggaaaatctttgaactatcttatgaagatgagatgtcaaatttacct
tctccaccagatgtgagcaattatttaatttcagaggactcgggatttgcaccaaatgga
agcgcaagtgtacctattactgaagtcatatctggtgcagacgttgaccaaaaactatcg
cagttggatgagaaattggccatggattcagacactagttcaacaacgaatattccagac
ttgagatcggaaacacctcagcaatcaatcccatctgttcagggtgtaaatcctttaagg
atgactattccatcacagaagggtttgcttggtgtaccggctagaagagatgtaagaaat
ccatcaggtgatccgcctattctcacgttacctgctcaaacatcagaacgtagctggtca
gtggaagatgcaaacaagggacttttgaatagtcgtggatttgtgtctgcacaagagcct
gataagtcaaaagctgataaacaacgatcttattcaaattcgcttggtcatagcatgaca
ccgtctattttatcagctcagcaacattccagggcaagggttgatgaggcaagtcctgga
caggaaattcctaaacaaaatcttacagccagtgggacgtcaggcgttgctgaaatttct
aattctcagaatccggctcctagcattagcaaagaagcacatgtcgatgctctaaaagta
aatacaattccctccggcttatctatcagcgtgctgcaagaaattggtcgaagatgttgc
tctaaggttgagttcaagccaattctaagcacaagtaaagatttgcagttctctgttgag
gtattgttcaccggtgagaagataggtgttggaatgggcaagactagaaaggatgctcaa
cagcaagctgctgaaagtgctcttcatttcttggctgagaagtatttggctacgtgttct
ggtttgattgaccgggatgataagcttccagtgcagaatgaaaatggatttgtatgggat
gacattaaccttcaatctgatgaactgtcatcagatgagaagctacatagagagaatgtt
tttgaggctacagaattaggacctcaaagtaatttcccaatgatcattaatcagttggca
ccgaagcttgggaactcacccaggttacagcattccttatctggtaaacagtcgaaagaa
gaaccagtacgagcttcacaaagttcatcgtctgcccgtcaacacaggaatggtcatccg
atattatga
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