Amaranthus tricolor (tampala): 130815163
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Entry
130815163 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130815163
04121 Ubiquitin system [BR:
atri04121
]
130815163
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130815163
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130815163
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130815163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-Nse
zf-RING_16
zf-RING_5
Rad50_zn_hook
DUF7560
zf-C3HC4_3
zf-C3H2C3
Zn_ribbon_DUF2089
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
130815163
NCBI-ProteinID:
XP_057537519
LinkDB
All DBs
Position
6:23117835..23120678
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AA seq
346 aa
AA seq
DB search
MSSNPPYSTPTQPTNFNQYWCYQCRCMVRISPDNNTFEIVCPRCFGHFVSEMNIPRPRLE
LDLTNNNNNNNDDIFLEARLLEALALMIDPPMRLRTHEPDNPWTIPRRQSRRDIVIEDPN
SVRHRWARLPRNSRSNDDMDIEPGPRGRTRSWIIVRPTGQPQGQLGSFQRGADPRNYFFG
PGLQELIEELTENDRPGPPPAPETAIEAVPTVKLTSEHVLEGNAECPVCKEEFEIGSEVR
ELKCKHVYHSDCIVPWLRMHNSCPVCRTELSIDHNQLAEESGGSNTELFGTESSRTEDGR
RPRRCFNWGCSWPFRSRYSRINPVADQNHWTSNGAGRSRWQFCNIL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaacccaccttactctacacccacccaacctacaaactttaaccaatattgg
tgctatcaatgtcgttgtatggtcagaatctcccctgataataacacatttgaaattgtt
tgccctcgatgttttggtcattttgtatccgaaatgaatatcccaaggccgagattggag
ttagatttaactaataataataataataataatgatgacatattccttgaggctcgactt
ttggaagccttggcccttatgatagacccacccatgaggttacggacccatgaacctgac
aacccgtggaccattccacgacgacaatctagaagagatattgttatagaagacccaaac
tcagtacgacatagatgggctcgattgccacgaaactcaaggtctaatgatgatatggat
attgaacctgggccacgtggtcggaccaggtcctggattatagttagacccacgggccaa
ccacaaggacaattgggctctttccaacgaggagcagatccaaggaactatttctttggg
ccaggcttacaagagctaattgaggagctgacggagaatgacaggccgggcccaccacca
gcaccagaaacggcgattgaggcggttccaacggtgaaattaacgtcagaacacgtgtta
gaagggaatgcagagtgtcctgtttgtaaggaagaatttgagattggaagtgaagttagg
gagttaaaatgcaaacatgtttatcattcagattgtattgtgccatggttaaggatgcat
aattcttgtccagtttgtagaacagaattaagtattgatcataatcaattagctgaagaa
agtggtggaagtaatacagaattgtttggaacagaaagttctagaactgaagatggtaga
aggcctagaagatgcttcaattggggatgttcttggccttttcgttcaagatattcaagg
attaatcctgttgctgatcaaaatcattggacttccaatggagctggtcgatcaaggtgg
caattctgcaacatcctttga
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