KEGG   Amaranthus tricolor (tampala): 130815177
Entry
130815177         CDS       T09367                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:atri04812]
    130815177
Cytoskeleton proteins [BR:atri04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     130815177
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Katanin_con80 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 130815177
NCBI-ProteinID: XP_057537541
LinkDB
Position
6:29846401..29854886
AA seq 835 aa
MAKSGYKLQEFVAHSANVNCLRIGKKACRLLLTGGDDHKINLWAIGKLTSLMSLCGHTTP
VESLAFDSTEVLVLGGASSGTVKLWDLEEAKMVRTLTGHRSNCTSVEFHPFGDFFASGSA
DTDLRVWDLRKKGCIHTYKGHHCGINNIKFTPNGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHDGHIRSLDFHPLEFLLATGSADKTVKFWDLETFEMIGSARAEATGVHVLTFHPDGKT
LFCGYENNLKVYSWEPVICHDSIEMGWSTLGDLCINDGKLIGCSYYQNSVGVSVADLSCI
EPYGTCDSGTPQERSPVEPKVDMRESRSAEAISTVGSTFSSRSTSPDPDAKEIKNIYVDY
EKPISTRKSRLHNTSKAVSSSDTKDTCKLSSKKHNTPTATSRKSNAQTGGRSFVVPTFVP
RDSSGGKRFFNSSSNSITPAKPGTGIPFKVSNARKSSKSKFDVDEAEPNFVDRVVQEVGA
RDSSGGKSFVNPRRESVIPESPGCGGSTKATHTRKLSQCKFDSDGIHSDFLDRLVLEVEA
RESGEDKNPSPESIEEKSSSPSFFKPQSAVAVSLGRTRSLVEKFERRVRFSGIEDQTTNT
SSDVNSDKIDNSTMLREEPQVSGRESASERDAYIIEDLMQNHDILLSGLRSRLTKLQMVR
HLWERNDIKGAILALKKLPDDSVQADVISVFSEKVELVTMDLFSCMLPILVRLLNGKFES
ASGCGCRSSSRREDCLLQREFYPASADPRTSSCTSQEGWITREICYAIESSSSRSLHLIL
TIIIICKEQKWICFLVITCQILMILTHWFLLTCHHLLMFFRLALNTKNQCYKIIK
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggctaaaagtggatataagcttcaggaatttgttgcacactcagcaaatgtgaattgt
cttcggattgggaagaaagcatgccgccttcttttgacaggtggagatgatcacaaaatt
aatttgtgggcgattggcaaactcacttctttgatgagtctatgtggtcatacaactccg
gttgaaagcttggcctttgattcaacagaggtattggtgcttggtggggcttcttctggc
acagtgaaattatgggatctggaagaggcaaaaatggttcggactctcactggtcataga
tccaattgcacgtctgttgaattccacccattcggagatttttttgcatctggttcagct
gacactgaccttagggtttgggatttaagaaaaaaaggatgtattcacacatacaaggga
caccattgtgggatcaataatattaagttcacaccaaatggtcgatgggttgtttctggt
ggatttgataatgttgtgaaggtttgggatttgactgctggaaaattgttgcatgatttt
aagttccatgatggtcacatcagatccttagacttccatccacttgagtttcttttagcc
acaggttcagcggataaaactgttaaattctgggatttggaaacttttgaaatgattgga
tctgccagggctgaggctactggagtgcatgttctaacctttcatcctgatgggaaaacc
ctcttttgcggatacgaaaataacctgaaggtttattcatgggagcctgtgatatgtcat
gattccattgaaatgggctggtcaacactaggtgatctctgcattaatgatggaaaactc
ataggttgctcttactaccagaattccgtaggagtttcggtggctgatctatcatgcatt
gagccttacggaacttgtgattctggtacgcctcaagagagaagccctgttgagccaaag
gttgacatgagagaaagccgatctgctgaagcaatttcaactgtggggtccacttttagc
tctcgttcaacatccccagatcctgatgctaaagaaattaagaatatatatgtcgactat
gaaaagcccatcagtactcgcaaaagtcgcttgcataatacctcaaaagctgtatcatcg
tctgacacgaaggatacctgcaagttgtcatctaaaaagcacaatactccgactgctact
tccagaaaatccaacgctcaaactggtggtagatcttttgttgtcccaacctttgttccg
agagacagttccggtggtaaaaggtttttcaattctagtagcaactcaattacaccagca
aaacctggtacgggaatcccattcaaagtttcgaacgcgcggaaatcatccaagagcaaa
tttgatgtagatgaagcggagccaaattttgttgacagggttgtacaggaagtgggagct
agagacagttccggtggtaaaagtttcgtcaatcctagaagagagtcagttatacctgaa
agtccaggttgtgggggttcgaccaaggctacacatacgaggaaattatctcagtgcaaa
tttgatagtgatggtatacattcagatttccttgataggcttgtgctggaagtggaagct
cgggaatcaggtgaagataagaatcctagtcctgaaagcattgaagaaaagtcatcttct
ccaagtttttttaaacctcagagtgctgtggcagtttctcttggaagaacgcgttctctt
gttgagaagtttgaaagacgagtaagattcagtggcattgaagatcaaacaacaaacaca
tcttctgatgttaattctgataagattgacaactctaccatgctaagagaagagccgcaa
gtttctggcagagagtcagcctcagaacgtgatgcatatattatcgaagatcttatgcaa
aatcatgatattctacttagtggtcttcgttctcgtctcacgaagttgcagatggttcgg
catttgtgggaacgaaatgacatcaaaggtgccattttagcactgaagaagttacctgat
gattctgtccaggctgatgtaattagtgttttctcggagaaggtggaacttgttaccatg
gacttgttcagttgtatgctacccatcctcgtgaggctactgaacggcaagtttgaaagc
gcctccggctgtgggtgtcgatcttcatcaagaagagaggattgcctgttgcaaagagag
ttttatccagcttcagcagatccaaggacttcttcctgcactagccaggaagggtggatc
actcgcgagatttgctatgcaattgaatctagttcttcaagatcactgcatttgattctc
accataatcataatttgtaaagagcaaaaatggatttgtttccttgttataacctgtcag
attttgatgattctaacacactggtttttgcttacttgccaccacctgttaatgttcttc
cggttggcgctaaacaccaagaatcagtgctacaaaataatcaagtag

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