Amaranthus tricolor (tampala): 130815178
Help
Entry
130815178 CDS
T09367
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130815178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130815178
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130815178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130815178
NCBI-ProteinID:
XP_057537544
LinkDB
All DBs
Position
6:27493682..27497959
Genome browser
AA seq
456 aa
AA seq
DB search
MDPGKLFIGGISWDTNVERLREYFQTFGDVIEAVIMKDRATGRARGFGFVIYADPAVADR
VVKQKHMIDGRTVEAKKAVPRDDQNIQTRNHGTPSASPVPTRTKKIFVGGLASTVTEGDF
KRYFEQFGTITDVVVMYDHNTQRPRGFGFITFDSEDAVERALINTFHDLNGKTVEVKRAV
PKELSPVPNRSPLGGGSSGLSRVNSFLNGYTQSYSPIPMGGHGVTIDDRQSPMPFTRGGY
PSFSPSSYGNALNYEPRMSPNFGETANIFPKLSFEQGLCAMPNSNVNRHDNFADFDGVNR
GNVSTLGSSSWSLWGNGSINETGFPGNNAPTSLRNIEANALTNSESIWNPPAIPAQGGGR
ASVSNGLGLGYARENNNVGSDVRLYGRDMRNRTLHVSSFPSLDGGFDAKFDDFLGGGSDQ
SLHLPSLGLKGSGSFEFGLGNSVSDVPLNNPAGLCW
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgggaagcttttcattggtggaatttcttgggacacaaatgtagaacgtttg
agggagtattttcaaacatttggtgatgttattgaagctgtgataatgaaggatcgagct
acaggccgtgctcgggggtttggctttgttatttatgccgacccagctgttgcagatcga
gttgttaagcagaaacatatgattgatggtagaactgttgaggcaaagaaagctgttcct
agagatgaccaaaacatccaaactagaaaccatggcacccctagtgcgtcgcctgtgcct
actcgcactaagaagatatttgtagggggtttagcatctactgtgaccgaaggggatttc
aaaaggtactttgagcagtttggaaccatcactgatgttgttgttatgtatgatcacaac
acccaaaggccaagaggatttgggttcatcacctttgactctgaagatgcagttgagaga
gcactgattaacacctttcatgatcttaatggaaaaacggttgaggtcaaacgcgctgtt
ccaaaagagttatcacccgtgccgaacaggagtcctttaggtggtggtagtagtggactt
agtagagttaacagcttcctcaatggctatacgcagagttacagtcctatccctatggga
ggacacggagtcacgattgatgatcgtcagagtcccatgccttttactcgaggtggatac
ccttcttttagcccgtctagttatggaaatgcattgaattatgaaccaagaatgagtcca
aactttggtgaaacagcaaatatctttccaaagctgagctttgagcaaggattatgtgca
atgcctaatagcaatgtcaacaggcatgacaattttgctgattttgatggggtgaacagg
ggtaatgtttctactcttggttcatcttcctggagcttgtggggaaatgggagcatcaat
gaaactggtttccccggtaacaatgctcctacgagtttgagaaatatcgaggcaaatgct
cttactaatagtgaatcaatttggaacccccctgccattcctgctcaaggcggagggcgt
gcttctgtctcaaacggtctcggtcttggttatgctcgtgaaaacaacaatgttggatct
gatgtgagattgtatggccgagatatgagaaataggacattacatgtatcttcttttcct
tcactagatggtgggtttgatgctaagtttgatgatttccttggtggtgggagtgatcag
tccttgcatttgccatctttgggactcaagggatctggttcatttgaatttggacttgga
aattccgtgtcagatgttccgctcaataatcctgctggtttatgctggtag
DBGET
integrated database retrieval system
