Amaranthus tricolor (tampala): 130815220
Help
Entry
130815220 CDS
T09367
Name
(RefSeq) protein transport protein SEC24 B-like
KO
K14007
protein transport protein SEC24
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130815220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130815220
Membrane trafficking [BR:
atri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130815220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
130815220
NCBI-ProteinID:
XP_057537590
LinkDB
All DBs
Position
6:6179857..6219541
Genome browser
AA seq
1078 aa
AA seq
DB search
MAAPVTPGAPRPNNSHSATSPPNYAPNMNTVSDSSLLQNFQSFHINQDPNARPVRRPPFA
QATNFPPSAAGQPSSFPGPSPVPRPGSSPSGVAPMATSVSSGPKAPPNMVPSRAFGGPSL
GAQPQSSAFRPSSQGPFAAGGMAPPSMVPGRPFGGPPLDMQHQPFASRPPSQLNTLPRAS
TFGPPRSQIVAPSMAHLSAFGSPPSATGHVAPLTATRGLVNNGTPMISTGAVLTGSQFPA
SGGLQQPPVGPPPSPFTGASPPSGSPFGVQPPPLHQVTPSMPGSVQPPRMYGMPPPGTTQ
TMAAMSAISQTGPSKIDPNQIPRPLPNSSVVVHETRVGNQATFPPPATTEYVVKDTGNCS
PRYMRCTINQIPCTSDLLGTSGMQLALLVQPLALPHPSEEVIQVVDFGEGGPVRCSRCKA
YINPFVKFIDQGRKFICNFCGFTDETPRDYQCNLGPDGRRRDANERPELCRGTVEFIASK
DYMVRNPMPAVFFFLIDVSMNALQTGATAAACSAINQVIVDLPDGPRTMVGIATFNSTIH
FYNLKRASQQPLMLIVPDVQDVYTPLETDVIVPLSECRQHVGLLLESIPTMFETNKMADS
ALGAAMKAAFLAMKSTGGKLLVFQSVLPSVGIGALSARVAEGGSNTYVQKEAQRLLQPAD
KTFKEFAIEFAEFQVCVDFFITTQSYVDIASISVVSRITGGQVYYYHPFSAVSDTAKLYN
DLRWNVTRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDVDLPAIDCDKALMVSLKHDD
KLQDGAECAFQCALLYTTVYGQRRIRVSTLSLQCTSILSTLFRSADLDTQFACFMKQAAV
GVPTTPLLQIREQVTNHCVNILHSYRKFCSNLSASSAGQLILPEALKLLPLYTLALIKST
GLRNDGRVDDRSFWLNYASPVSTPLAVPLVYPRMFSVHDLVSRESDSSIIPSVIPLSSEH
VNDEGIYLLENGEDALVYVGNSVDPSILQSVFGTTSIDEVPIQFVLQQFDNPLSKKLNEV
VNEIRRQRCSYLRFRLCRKGDALGMLFFSYMVEDKSPMGLSYVEFLVHIHRQIQGKMT
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctgtaactccaggggcacctagacccaacaactcgcactcagcaacatca
cccccgaattatgcaccaaatatgaatacggtttctgattcatcattattgcaaaatttc
cagagcttccacatcaatcaggatccaaatgcccgacctgttaggcgtccgccttttgcc
caggccactaatttccctccatctgctgctgggcaaccctcttcttttcctgggccttca
cctgttcccaggcctggctcttcaccatcaggtgtagcgcctatggccacatcagtttca
tcaggaccaaaggccccacctaatatggtacctagtagagcctttggtggtccttccctg
ggtgcgcaacctcaatcctctgctttcagaccttcttcccaagggccttttgcggcaggt
ggtatggctccacctagtatggtacctggtcgaccctttggtggtcctcccctggatatg
caacatcagccctttgcatctagacctccttctcaacttaacactcttcccagagcatct
acgtttggtcctcccagatctcaaattgtggctccttctatggcgcatctcagtgccttt
gggtcgcccccaagtgctactggtcatgttgctccactgactgctactcgaggccttgtt
aacaacggaactcctatgatttcgactggggcagtattgactgggtctcaatttccagct
tcaggaggccttcaacagcccccagttgggccccctccatcaccctttacaggtgcatca
cctccttcaggatctccatttggtgtgcagcctcctcctcttcaccaggtgactccctcg
atgcctggttctgtgcaaccacctaggatgtatggtatgccaccaccaggaacaactcaa
accatggctgcaatgtctgctattagtcagactgggccatcaaagattgatcctaatcaa
attccgcgtccccttccaaattcatctgttgtcgtgcatgaaacacgggttggaaatcag
gccacttttcctccgcctgctacaactgagtacgttgtcaaggacactggaaattgtagc
cctcgctacatgaggtgtaccattaatcagataccttgtacttctgatcttcttggaact
tcagggatgcaattagctttattagttcaaccattagcacttccacatccatccgaagag
gttatccaggtagttgattttggtgaaggtggtccagtgcgatgttcacgatgcaaagcc
tatataaatccatttgtaaaatttatcgatcagggaagaaaattcatatgtaatttttgt
ggttttactgatgaaactcctcgtgattatcaatgcaatttagggcctgatggccggcgt
agagatgcaaatgaaaggcctgagttgtgtagaggaactgtcgagtttattgcttctaaa
gattatatggtacgtaatccaatgcctgcagtctttttcttccttattgatgtatccatg
aatgcattacaaactggtgcaactgcagcagcttgcagtgctatcaatcaagttattgtt
gacctaccagatggtccgagaactatggtgggaattgcaacatttaattccacaatacat
ttttacaacctgaagcgtgcgtcacagcagccattaatgctcatagttcctgatgtacaa
gatgtttatacacctcttgaaactgatgtgatagttccgctttcagagtgccgtcagcat
gtggggttattgttggaaagcattccaaccatgtttgagactaataaaatggcagattca
gctcttggtgcagcaatgaaggctgcatttttggcaatgaagagtactggtggaaaactt
ttggtttttcagtcagtgttaccatcagttggcattggtgcactttctgctagggtggca
gaaggtggatctaatacttatgttcagaaggaagcccaaagattgctccagcctgctgat
aagacattcaaagaatttgctattgaatttgctgagttccaggtttgtgtggattttttc
atcaccacccaatcatatgtagacattgcttccatctctgttgtttcaaggattactgga
ggacaggtgtattactaccatcccttctcagctgtctctgatacagccaagctttataat
gatcttagatggaatgtgactagaccacaaggttttgaagcagttatgcgtgtaaggtgc
agccagggtatacaagttcaagagtactcaggaaatttctgcaaacgtattccaactgat
gtggatcttccggcgattgactgtgacaaggctctcatggtatctcttaaacatgatgat
aaactacaagatggcgcagaatgtgctttccagtgtgcacttctctataccactgtttat
gggcaacgaagaattcgtgttagcaccctttctcttcaatgcacaagcattttgagtacc
ctgtttcgctcagctgacttagatacgcaatttgcatgtttcatgaagcaagctgctgtt
ggagttccgaccactccactcttacaaatcagggagcaggtgacaaatcattgtgtcaac
attctgcattcttatagaaagttctgctcaaatttatctgcatcatcagctggccagctt
attcttccagaggcactcaagcttttgcctctgtatactttagcattaatcaaaagcact
gggttgcggaatgatgggcgtgtagacgatcgctccttctggttaaactatgcctctccc
gtgtctactccattggcagtcccactggtgtatcctaggatgttctctgtccatgatctt
gtatccagggagtcagacagttccataattccttctgtcatcccgctctctagtgagcat
gtgaatgatgaagggatttatcttcttgaaaatggggaggatgccttggtctatgttggg
aattctgtggatcctagtattttacaatctgtgtttggtacaacctcaattgatgaagta
ccaattcagtttgtgttgcagcaatttgataatccactatccaagaagttaaatgaggta
gtaaatgagataagacgacaacggtgttcctatctccgcttcaggttgtgcaggaaaggc
gatgctttaggaatgttgttcttctcatatatggtggaagataaaagcccgatgggtctc
tcgtatgttgagtttttggtccatatccatcgacagattcaaggtaaaatgacttga
DBGET
integrated database retrieval system
