KEGG   Amaranthus tricolor (tampala): 130815282
Entry
130815282         CDS       T09367                                 
Name
(RefSeq) ras-related protein Rab7A
  KO
K07897  Ras-related protein Rab-7A
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04142  Lysosome biogenesis
atri04144  Endocytosis
atri04145  Phagosome
atri04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130815282
   04145 Phagosome
    130815282
   04142 Lysosome biogenesis
    130815282
   04148 Efferocytosis
    130815282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130815282
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atri04147]
    130815282
   04031 GTP-binding proteins [BR:atri04031]
    130815282
Membrane trafficking [BR:atri04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    130815282
Exosome [BR:atri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130815282
  Exosomal proteins of other body fluids (saliva and urine)
   130815282
  Exosomal proteins of colorectal cancer cells
   130815282
  Exosomal proteins of bladder cancer cells
   130815282
GTP-binding proteins [BR:atri04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    130815282
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 nSTAND3 AAA_7 Septin AAA_24 AAA_16 ATPase_2 PduV-EutP NACHT G-alpha AAA_22 AAA_14 NTPase_1 CATSPERZ_C cobW NB-ARC DAP3 ABC_tran SRPRB ATP-synt_ab TniB RNA_helicase MCM
Other DBs
NCBI-GeneID: 130815282
NCBI-ProteinID: XP_057537680
LinkDB
Position
6:16445814..16451743
AA seq 207 aa
MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFENLNRWREEFLLQASPSDPDNFPF
ILLGNKIDVDGGSSRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFLCIAKNAIMNE
PEEELYVPDTIDMTNRTQPRSSSGCEC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcatctcgtcgtcgaaagcttctcaaaatcatcattctcggtgatagtggggttgga
aagacttcactcatgaatcaatttgtgaataaaaagttcagtaatcagtataaagctacg
attggagctgatttcttgactaaagaactccaatttgaagataggcttttcacattgcag
atttgggatacagctggacaggagagatttcagagtctaggtgttgctttttaccgtggt
gcagattgttgtgttcttacctatgatgtaaatgtcatgaaatcttttgagaacctgaat
cggtggagagaggagttcttgttacaggcgagcccttccgatcccgataatttcccattt
attctgctgggtaacaagatcgatgttgatggtggtagcagtagagtggtctcagaaaag
aaggctaaagcgtggtgcatgagcaaggggaatataccatactttgaaacatctgccaaa
gatggtacgaatgttgaagaggccttcctgtgcattgctaaaaatgccataatgaatgag
cccgaagaagaactgtatgttccggacaccatagatatgacaaacagaacgcaacctcga
agctcctcaggctgtgaatgctga

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