KEGG   Amaranthus tricolor (tampala): 130815374
Entry
130815374         CDS       T09367                                 
Name
(RefSeq) protein SLOW WALKER 1
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    130815374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atri03009]
    130815374
Ribosome biogenesis [BR:atri03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    130815374
SSDB
Motif
Pfam: UTP15_C WD40_Prp19 WD40 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT122_1st NBCH_WD40 Utp12 Beta-prop_WDR19_1st WD40_RFWD3 WDR54 Beta-prop_IFT140_1st Beta-prop_DCAF4 Cupin_NOL9 Beta-prop_Nup120_160 Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 130815374
NCBI-ProteinID: XP_057537809
LinkDB
Position
6:complement(22437185..22439142)
AA seq 530 aa
MADLQTFPTKPRLKPTSKQPNRSPESKYWKSFKTHQISGLVSSITSINFSPLSPHHFAAT
YGASLSFFNPHHPFTPTEPLSTIHSFKDTSFSASFRSDGKLLAAGCQSGTIHVFEAKTRN
NLRQLKGHTRPVRLVQYPRNDLLHLFSASDDSIVKYWDVATETSLNNLMGHKDYVRSGSP
SPVDDNLFVTGSYDHTVRVWDIRGFASGSNSSAMVINHGKPVEDVQYLPSGGLIATAGGN
VVKIWDVIGGGRCLYTLETHNKTVTSICVGKMGKDSGDESDQYRLLSVSLDGYFKVFDYS
KLKVTFSMRFPAPLLSVGFSPDCSTRVIGTSNGIIYMGKRKEKIDEKPSIDQGFLGFQYR
DEPKRVLKPSSFRYFHRGQSEKPKGGEYLILKPKKVKLAEHDKLLKKFRHKDAFVAVLQR
KNPENVVAVMEELIARKKLFKCVSNLDVGELEMLLGFLQKYTTLPRYAGLLMPFASKVIQ
MQAEELRSNDKLKSQIRNLKRSIQEELRIQQSLLEIQGIISPLMRIAGRR
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcagatcttcaaaccttccctacaaaacctcgtctaaaacccacctccaaacaaccc
aatagatcccctgaatccaagtattggaaatctttcaaaacccaccaaatttctggcctt
gtttcttcaattacctccattaatttttcccctctttctccacaccatttcgcagctacc
tatggtgcttctctctcttttttcaacccacatcaccctttcacccctacggaacctctt
tccactatccactccttcaaagacacctcgttttctgcatcatttcgctccgatggcaaa
ctccttgctgcaggttgtcagtctggaaccatccacgtttttgaggctaaaacccgaaat
aatcttcgacaattgaaaggacatactcgtcctgtaaggttagttcaatacccacgaaat
gatcttttgcatttattttctgcttcggatgattctatagttaagtactgggatgttgct
actgaaacttctttgaataatttaatgggtcacaaagattatgttagaagtggatcccct
tctcctgttgatgataatttgtttgttactgggtcatatgatcacactgtaagggtttgg
gatattaggggtttcgcttcaggttcaaattcatcagccatggtgataaaccatggaaaa
cctgtggaagacgttcaatatttaccctctggtgggttgattgccactgctggagggaat
gtggtgaagatttgggatgtaattggaggtgggagatgtttgtatactttagaaactcat
aataagactgttacatcaatttgtgttggtaaaatggggaaagatagtggggatgaatct
gatcaataccgtcttttgagtgtttctttagatgggtatttcaaagtttttgattattca
aagctgaaagttacattttcaatgaggtttcctgcacctttgttgtcagtagggttttcc
ccagattgttcgacacgagtaattggaacctcaaatgggattatatacatggggaaaagg
aaggagaaaatcgacgaaaaacctagtattgatcaagggtttttaggatttcagtacagg
gatgaacctaagagggttttaaagccatcgtcttttaggtattttcatcgcgggcagagt
gaaaaaccgaaagggggtgagtatttgatattaaagccaaagaaagttaaattagctgag
catgataagctattaaagaagtttaggcacaaagatgcttttgtagctgttcttcagagg
aagaacccggaaaatgtggttgctgtaatggaagaattgatagcaaggaagaaattgttc
aaatgtgtgtcgaatttggatgtcggggagcttgagatgttgttggggttcttgcaaaag
tatactactcttcctaggtatgctggtttgttgatgccatttgctagtaaggttattcag
atgcaagctgaggaacttcgatctaatgataaacttaagtcccaaattaggaatttgaaa
cggtcgattcaggaagagttgaggatacaacaatcattgctggaaatacagggaataatt
tctcccttgatgagaattgcagggaggagatag

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