KEGG   Amaranthus tricolor (tampala): 130815390
Entry
130815390         CDS       T09367                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2-like
  KO
K12195  charged multivesicular body protein 6
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03250  Viral life cycle - HIV-1
atri04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130815390
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130815390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130815390
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atri04147]
    130815390
Membrane trafficking [BR:atri04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    130815390
Exosome [BR:atri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130815390
  Exosomal proteins of other body fluids (saliva and urine)
   130815390
SSDB
Motif
Pfam: Snf7 TINF2_N Phage_RB18_ORF43
Other DBs
NCBI-GeneID: 130815390
NCBI-ProteinID: XP_057537835
LinkDB
Position
6:28536358..28541438
AA seq 224 aa
MGNIFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEAVIEAEKQAARDLIREKKKDRALL
ALKKKKVQEELLQKVDAWLINVEQQLADIELASKQKAVFESLQAGNTAMKAIQSEINLED
VQKLMDDTAEAKAYQDEINAILGEQLSAEDEEEVLAEFENLEAQLIVQDLPEVPTTAPEE
GEDLDLPDVPTKTPVASTAAADDIEEASDTLPEKRRVMEEPLPA
NT seq 675 nt   +upstreamnt  +downstreamnt
atgggtaatatttttgtgaagaaacccaagatcactgaggttgatcgtgcaattctctct
cttaaaactcaaagacgaaagcttggtcaatatcaacagcagcttgaagctgtcattgaa
gctgaaaaacaagctgcaagggacttgattcgtgaaaagaaaaaagacagagccttgctc
gcgttaaagaagaagaaagtacaagaagaattgctgcaaaaagtcgatgcatggctaatt
aacgttgagcagcaattggcagatattgaattagccagcaagcagaaagccgtttttgag
agcttgcaggcaggaaatactgctatgaaagcaattcaaagtgagattaatctggaagat
gttcagaagttgatggatgatactgcagaggctaaagcatatcaagatgaaattaatgcc
attttgggagagcaattatctgctgaagacgaggaagaagttttagcggaattcgagaat
cttgaagcacagctgatcgtccaagatctgccagaagttccgactacagctcctgaagag
ggagaggacctggacctacctgatgtacctaccaagactcccgttgcttcaactgctgct
gctgacgatattgaggaggcctccgatacacttcctgaaaaacgaagagttatggaagaa
cctttgcccgcatag

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