Amaranthus tricolor (tampala): 130815839
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Entry
130815839 CDS
T09367
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04136
Autophagy - other
atri04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130815839
04136 Autophagy - other
130815839
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atri01001
]
130815839
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130815839
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130815839
Protein kinases [BR:
atri01001
]
Serine/threonine kinases: Other
VPS15 family
130815839
Membrane trafficking [BR:
atri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130815839
Autophagy
Autophagosome formation proteins
PI3K complex
130815839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIK3R4-like_middle
Pkinase
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
PK_Tyr_Ser-Thr
EIF3I
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
HEAT
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_Gbeta
DSE1_N
ASA1
WD40_MABP1-WDR62_2nd
TCAD9
CFAP251_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
APH
Cohesin_HEAT
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
130815839
NCBI-ProteinID:
XP_057538324
LinkDB
All DBs
Position
6:18784113..18794861
Genome browser
AA seq
1551 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DQIDLREYEKRLFHIRDTFRSIEHPHVWPFQFWLETDKAAYLLRQFFFNNLHDRLSTRPF
LSLIEKKWLAFQLLCAVKQSHEHGICHGDIKCENVLVTSWNWVYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRLCYLAPERFYEHGDDMLVTPDASLKPSMDIFAVGCVIAELFLEGHP
LFELSQLLAYRRGQYDPTQHLEKIPDPGVRKMILHMIQLNPDERLSAEGYLQSYAGIAFP
NYFSPFLHNLYSCLSSLDSDARVVMCQSAFLEIVKQMKTNNFGTETNGGLGITSNDPAIK
ISQQMVSKQVLSYSKVSSKKEILTRGLANEGIELLGDLSALLRDVDHSNHFSSDKTNQDD
TSKIHFLHTQEVYNLQSPNLLQTISDMFKKREHAFLKNITIDDLKSLMSDYDSESDTYRM
PFLQLPPDETRCEGMVLIASLLCSCIRNVKFPQLRRCCILLLRYLSIYIDDEDRLQRVLP
YVIVMLSDSAAIVRCAALETLCDILPLVREFPLSDAKIFPEYILPMLSTLPDDSEESVRI
CYASNISKLALTSYGFLVHSIRLSEAGVLDVLSAPQKSLAPSTDNRQALLAYSNKELAHL
RKSIAEVVQELVMGPKQTPNIRRALLLDIAGLCCFFGQRQSNDFLLPMLPAFLNDRDEQL
RTVFYRQIVYVCFFVGQRSVEEYLSPYIEQALSDTNEGVISHTLDCLTVLCNSGLLRKRL
LLEMIEHAFPLLCYPSQWVRRSVASFIAASSESLGAVDSFVFLAPVVRPFLRRQPASLAS
VKALLSCLKSPVSRQVFYQVLENARGSDMLERQRKIWYNTSQAKQWDAVDLLKQNEELLS
LEKWPDSHQVLEDQNVGGLSVDQIETTESDSTEAKLRALSGCIGHASSIIDSRDPLSSEK
LQFSGLITPQLSSINSILHENSSENIPLYSFSLDRRGLGNTQAVSDTSLQPSLLGLSSST
TPWLDSVNKPFGMPSSVPSPRLVSGSFSIANGTKQFHRVVHEPESRESDQASYISSKFQD
LGISSSSSTKGSSTSVEDAPSSSEVSGSPSVSRSSVLPDSGWKPRGVLVAHLQEHRSAVN
DIAVSTDQSFFVSASDDSTVRVWDSRKLEKDISFRSKLTYSLESSRALCITMIRGSAQVV
VGACDGSIHLFSVDYISRGLGHVVEKYSGVADVKKKDVGEGAVLSLVNYSADPSSSHLVM
YSTQNYGIHLWDTRANTDSWTLKSLPEEGYISTLETDPCGNWFISGSSRGVLTLWDLRFR
IPVNTWQYPRTCPIETMCLYVPQPNTPFSSMARPLVYVAAGCNEVSLWNAETGSCHQVFR
VPGNDGDAEFSELPWALARPQNKANSKSDPRRNVNLKYRVDELNEPPPRLSGIRSLLPLP
GGDLLTGGTDLKIRRWDHSRPERSYCVCGPTIKGLGNDELYESKSSFGVQVVQEMRKRPT
TTKMSTKAVLAAAATDPAGCHRDSVLSLASVKLNQRLLLSSSRDGAIKVWK
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagattgcaagaacaacacaagcatcagcaacagagtattatcttcatgac
cttccttcatcttacaatttagtcttgaaagaagtacttggtagaggtcgtttcttcaaa
tcaattttgtgtaaacatgatgaaggtcttgttcttgttaaagtctactttaaacgaggt
gatcagatcgatttaagagagtatgaaaagcgtctctttcatattcgtgatactttccgt
tcaattgaacacccccatgtttggccttttcagttttggctggagactgacaaggcggca
tatttactcaggcagtttttcttcaataatctccatgataggctcagtacacggcccttt
cttagccttatcgagaagaaatggcttgcatttcagcttttgtgcgcagtgaagcaaagt
catgagcatgggatttgtcatggtgatataaagtgtgagaacgttttggttacttcttgg
aattgggtttacctcgctgactttgcatcttttaaacccacctacattcctgatgatgat
ccatctgatttctcgtttttcttcgatactggtggcagaaggctatgttatctcgcaccg
gagagattctacgagcatggagatgatatgctagtcactcctgatgcatctcttaaacct
tccatggatatcttcgccgtggggtgcgtaattgctgagcttttcctggagggtcatcca
ctattcgaactttctcagcttcttgcttatcggagaggccaatatgatcctacccaacat
cttgagaagatccctgatccaggagtacggaagatgattcttcacatgattcagttgaat
cccgatgagcgactatctgctgaaggttatttgcagagttatgctggcattgcgtttcct
aactatttttcaccatttctgcacaacttatattcatgtttgagctcacttgactctgat
gcaagggttgtaatgtgtcagagcgcgtttcttgaaatagttaagcagatgaaaaccaat
aattttggcaccgagacaaatggaggacttgggataacatccaacgatcctgctatcaag
atttctcaacaaatggtctcgaaacaagttctaagctattccaaagtctcttcgaaaaag
gaaatcttgacgagaggcttggctaatgaaggaattgagctccttggtgatttaagtgcg
ttacttagggacgtggatcactcaaatcatttttctagtgataaaacgaatcaggacgat
acatctaaaattcactttttgcacacacaggaggtgtataacttacaatctcctaatctg
cttcaaaccatttctgatatgtttaagaaacgggaacatgcctttttgaagaatatcact
attgatgacttgaaatcattgatgtcggactacgacagtgaatcagatacgtatcgcatg
ccctttctacagctacctcctgatgaaactcgttgtgaaggtatggtcctcattgcttcg
ctgctatgctcatgcatacgtaatgtcaagtttcctcagctgcggcgttgttgtatactc
ttgttgaggtatttatctatatatatcgatgacgaagatcgacttcagcgtgtgctccca
tatgtgattgttatgctatcggactcagctgccattgttcgctgtgctgccttggagact
ttgtgtgatatattgccattagttagggaatttcctctcagtgatgccaaaatctttcct
gaatacattctacctatgctttctacgcttcccgatgattccgaggaaagtgtgcggatt
tgttatgcgagcaacatatccaaactcgctttaacatcgtatggatttttagttcattca
ataagattgagtgaggctggtgtgttagatgtattgagtgcaccacagaagtctctggca
ccatcgactgataatcgtcaggcacttttagcatacagcaataaagaacttgctcatctc
agaaaatccatagctgaggttgttcaggaacttgttatggggccgaagcaaacacccaat
attaggagggctcttttgttggatattgctggtttgtgttgtttctttggccaaagacag
agcaatgattttctgttgcctatgcttcctgcattccttaatgaccgtgacgagcagctc
aggactgttttctacaggcagatagtgtatgtttgcttttttgttggccaaagaagtgtc
gaggaatatctttctccgtatattgagcaggctttgagtgatacaaatgaaggtgttata
tcgcatacattggattgtttgactgtactgtgtaatagtggtttattacggaaaaggctg
ctacttgaaatgatagaacatgcctttccgttgttatgttatcctagccaatgggtcagg
aggtcagttgcatctttcattgctgcgagtagtgagagtcttggtgctgtggactccttt
gtatttttagccccagttgttcgcccttttctgcggcggcagccagcttccttggcttct
gtgaaggctcttctttcatgcttaaaatctcctgtttctcgacaggtattttaccaagta
ttagaaaatgcccggggatcagacatgctggagagacagagaaagatttggtacaataca
tctcaagctaaacaatgggatgctgttgatttgctgaaacaaaatgaggaattgctttcc
ctggagaagtggccagacagtcatcaagtacttgaggatcagaatgttggtgggctttct
gttgaccaaatagagacgacggaaagtgatagtacagaggccaaattgagagctttgagc
ggttgtattggccatgcttctagtataattgatagtagggatcctctttcgtctgaaaag
ttacagttctctggcttaattactcctcagcttagtagtattaatagcatccttcatgaa
aattcatcagaaaacatacccctttattctttctctctagacagaagaggattggggaat
acacaagcagtatccgacacttcgttgcagccgagcttactaggattaagctcatctact
acaccttggctggattcagtaaacaaaccatttggcatgccaagttcagtgccttcaccc
aggcttgtctcggggtcattcagcattgccaatggcactaaacagttccatcgtgtggta
catgagccggaatcccgggaaagtgaccaagcatcgtatataagcagcaaatttcaagat
ttgggaatttctagcagtagcagtacaaaaggaagttcaacatctgttgaggacgctcct
tcatcgagtgaagtttctggatcaccatctgtttcacggtcttcagtgcttcctgactcc
gggtggaaacctcgtggagtgttggttgctcatctacaggaacatcgctctgctgtgaat
gatattgctgtttcaacggaccagagcttttttgttagtgcatctgatgattcaactgtg
agggtttgggactcaaggaagttagagaaggatatttcatttaggtctaaattgacttat
tccttggagagtagccgggcattgtgcataacaatgattcggggttctgcacaagttgtt
gttggtgcatgtgatggcagcattcacttgttttccgtggattacatttcccgaggccta
ggccatgttgttgagaagtattcaggtgttgctgatgtcaagaagaaggatgttggagaa
ggtgccgttcttagtcttgtcaactactctgctgatccgtcatcaagccacttggttatg
tacagcactcagaattatggtattcatctctgggacaccagggctaatactgattcatgg
acactgaaatcacttcctgaggagggttatatctctactttggaaactgatccttgtggt
aactggttcatatcaggatcgtctaggggtgtattgactttatgggatcttaggtttcgt
ataccggtcaacacatggcaatatcctcgtacatgccctatagaaaccatgtgtctctat
gttccacaaccaaatactcctttttcttctatggctaggcctcttgtatatgttgctgct
ggttgtaatgaagtgtctctttggaatgcagaaactggaagctgccatcaggtatttcga
gtaccaggtaatgatggtgatgctgagttttccgagttgccttgggcattagccagaccc
caaaacaaggcgaattctaaatcagatcctagacgaaatgtcaacctgaaataccgtgtt
gatgagttgaatgaaccacctcctcgtctgtctggtattcgttccttacttcctctgcct
ggtggagatttattaactggcggaaccgatttgaagatacgtagatgggaccatagcaga
cctgagcgcagttactgtgtgtgtgggccaacaattaagggcctgggaaatgatgaactc
tatgaaagcaaatctagctttggtgtgcaggtcgtgcaggaaatgagaaaacgaccaacc
actacgaaaatgagtacaaaagcagttcttgcagcagctgctactgatcctgcgggttgc
catcgtgactcggttctctccctcgcgtctgtcaaattgaaccagagattattgttatca
agcagtagagatggagcaattaaggtctggaaatga
DBGET
integrated database retrieval system
