Amaranthus tricolor (tampala): 130815839
Help
Entry
130815839 CDS
T09367
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130815839
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atri01001
]
130815839
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130815839
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130815839
Protein kinases [BR:
atri01001
]
Serine/threonine kinases: Other
VPS15 family
130815839
Membrane trafficking [BR:
atri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130815839
Autophagy
Autophagosome formation proteins
PI3K complex
130815839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
PK_Tyr_Ser-Thr
EIF3I
NBCH_WD40
HEAT
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
PPP2R1A-like_HEAT
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
TCAD9
APH
Cohesin_HEAT
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
130815839
NCBI-ProteinID:
XP_057538324
LinkDB
All DBs
Position
6:18784113..18794861
Genome browser
AA seq
1551 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DQIDLREYEKRLFHIRDTFRSIEHPHVWPFQFWLETDKAAYLLRQFFFNNLHDRLSTRPF
LSLIEKKWLAFQLLCAVKQSHEHGICHGDIKCENVLVTSWNWVYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRLCYLAPERFYEHGDDMLVTPDASLKPSMDIFAVGCVIAELFLEGHP
LFELSQLLAYRRGQYDPTQHLEKIPDPGVRKMILHMIQLNPDERLSAEGYLQSYAGIAFP
NYFSPFLHNLYSCLSSLDSDARVVMCQSAFLEIVKQMKTNNFGTETNGGLGITSNDPAIK
ISQQMVSKQVLSYSKVSSKKEILTRGLANEGIELLGDLSALLRDVDHSNHFSSDKTNQDD
TSKIHFLHTQEVYNLQSPNLLQTISDMFKKREHAFLKNITIDDLKSLMSDYDSESDTYRM
PFLQLPPDETRCEGMVLIASLLCSCIRNVKFPQLRRCCILLLRYLSIYIDDEDRLQRVLP
YVIVMLSDSAAIVRCAALETLCDILPLVREFPLSDAKIFPEYILPMLSTLPDDSEESVRI
CYASNISKLALTSYGFLVHSIRLSEAGVLDVLSAPQKSLAPSTDNRQALLAYSNKELAHL
RKSIAEVVQELVMGPKQTPNIRRALLLDIAGLCCFFGQRQSNDFLLPMLPAFLNDRDEQL
RTVFYRQIVYVCFFVGQRSVEEYLSPYIEQALSDTNEGVISHTLDCLTVLCNSGLLRKRL
LLEMIEHAFPLLCYPSQWVRRSVASFIAASSESLGAVDSFVFLAPVVRPFLRRQPASLAS
VKALLSCLKSPVSRQVFYQVLENARGSDMLERQRKIWYNTSQAKQWDAVDLLKQNEELLS
LEKWPDSHQVLEDQNVGGLSVDQIETTESDSTEAKLRALSGCIGHASSIIDSRDPLSSEK
LQFSGLITPQLSSINSILHENSSENIPLYSFSLDRRGLGNTQAVSDTSLQPSLLGLSSST
TPWLDSVNKPFGMPSSVPSPRLVSGSFSIANGTKQFHRVVHEPESRESDQASYISSKFQD
LGISSSSSTKGSSTSVEDAPSSSEVSGSPSVSRSSVLPDSGWKPRGVLVAHLQEHRSAVN
DIAVSTDQSFFVSASDDSTVRVWDSRKLEKDISFRSKLTYSLESSRALCITMIRGSAQVV
VGACDGSIHLFSVDYISRGLGHVVEKYSGVADVKKKDVGEGAVLSLVNYSADPSSSHLVM
YSTQNYGIHLWDTRANTDSWTLKSLPEEGYISTLETDPCGNWFISGSSRGVLTLWDLRFR
IPVNTWQYPRTCPIETMCLYVPQPNTPFSSMARPLVYVAAGCNEVSLWNAETGSCHQVFR
VPGNDGDAEFSELPWALARPQNKANSKSDPRRNVNLKYRVDELNEPPPRLSGIRSLLPLP
GGDLLTGGTDLKIRRWDHSRPERSYCVCGPTIKGLGNDELYESKSSFGVQVVQEMRKRPT
TTKMSTKAVLAAAATDPAGCHRDSVLSLASVKLNQRLLLSSSRDGAIKVWK
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagattgcaagaacaacacaagcatcagcaacagagtattatcttcatgac
cttccttcatcttacaatttagtcttgaaagaagtacttggtagaggtcgtttcttcaaa
tcaattttgtgtaaacatgatgaaggtcttgttcttgttaaagtctactttaaacgaggt
gatcagatcgatttaagagagtatgaaaagcgtctctttcatattcgtgatactttccgt
tcaattgaacacccccatgtttggccttttcagttttggctggagactgacaaggcggca
tatttactcaggcagtttttcttcaataatctccatgataggctcagtacacggcccttt
cttagccttatcgagaagaaatggcttgcatttcagcttttgtgcgcagtgaagcaaagt
catgagcatgggatttgtcatggtgatataaagtgtgagaacgttttggttacttcttgg
aattgggtttacctcgctgactttgcatcttttaaacccacctacattcctgatgatgat
ccatctgatttctcgtttttcttcgatactggtggcagaaggctatgttatctcgcaccg
gagagattctacgagcatggagatgatatgctagtcactcctgatgcatctcttaaacct
tccatggatatcttcgccgtggggtgcgtaattgctgagcttttcctggagggtcatcca
ctattcgaactttctcagcttcttgcttatcggagaggccaatatgatcctacccaacat
cttgagaagatccctgatccaggagtacggaagatgattcttcacatgattcagttgaat
cccgatgagcgactatctgctgaaggttatttgcagagttatgctggcattgcgtttcct
aactatttttcaccatttctgcacaacttatattcatgtttgagctcacttgactctgat
gcaagggttgtaatgtgtcagagcgcgtttcttgaaatagttaagcagatgaaaaccaat
aattttggcaccgagacaaatggaggacttgggataacatccaacgatcctgctatcaag
atttctcaacaaatggtctcgaaacaagttctaagctattccaaagtctcttcgaaaaag
gaaatcttgacgagaggcttggctaatgaaggaattgagctccttggtgatttaagtgcg
ttacttagggacgtggatcactcaaatcatttttctagtgataaaacgaatcaggacgat
acatctaaaattcactttttgcacacacaggaggtgtataacttacaatctcctaatctg
cttcaaaccatttctgatatgtttaagaaacgggaacatgcctttttgaagaatatcact
attgatgacttgaaatcattgatgtcggactacgacagtgaatcagatacgtatcgcatg
ccctttctacagctacctcctgatgaaactcgttgtgaaggtatggtcctcattgcttcg
ctgctatgctcatgcatacgtaatgtcaagtttcctcagctgcggcgttgttgtatactc
ttgttgaggtatttatctatatatatcgatgacgaagatcgacttcagcgtgtgctccca
tatgtgattgttatgctatcggactcagctgccattgttcgctgtgctgccttggagact
ttgtgtgatatattgccattagttagggaatttcctctcagtgatgccaaaatctttcct
gaatacattctacctatgctttctacgcttcccgatgattccgaggaaagtgtgcggatt
tgttatgcgagcaacatatccaaactcgctttaacatcgtatggatttttagttcattca
ataagattgagtgaggctggtgtgttagatgtattgagtgcaccacagaagtctctggca
ccatcgactgataatcgtcaggcacttttagcatacagcaataaagaacttgctcatctc
agaaaatccatagctgaggttgttcaggaacttgttatggggccgaagcaaacacccaat
attaggagggctcttttgttggatattgctggtttgtgttgtttctttggccaaagacag
agcaatgattttctgttgcctatgcttcctgcattccttaatgaccgtgacgagcagctc
aggactgttttctacaggcagatagtgtatgtttgcttttttgttggccaaagaagtgtc
gaggaatatctttctccgtatattgagcaggctttgagtgatacaaatgaaggtgttata
tcgcatacattggattgtttgactgtactgtgtaatagtggtttattacggaaaaggctg
ctacttgaaatgatagaacatgcctttccgttgttatgttatcctagccaatgggtcagg
aggtcagttgcatctttcattgctgcgagtagtgagagtcttggtgctgtggactccttt
gtatttttagccccagttgttcgcccttttctgcggcggcagccagcttccttggcttct
gtgaaggctcttctttcatgcttaaaatctcctgtttctcgacaggtattttaccaagta
ttagaaaatgcccggggatcagacatgctggagagacagagaaagatttggtacaataca
tctcaagctaaacaatgggatgctgttgatttgctgaaacaaaatgaggaattgctttcc
ctggagaagtggccagacagtcatcaagtacttgaggatcagaatgttggtgggctttct
gttgaccaaatagagacgacggaaagtgatagtacagaggccaaattgagagctttgagc
ggttgtattggccatgcttctagtataattgatagtagggatcctctttcgtctgaaaag
ttacagttctctggcttaattactcctcagcttagtagtattaatagcatccttcatgaa
aattcatcagaaaacatacccctttattctttctctctagacagaagaggattggggaat
acacaagcagtatccgacacttcgttgcagccgagcttactaggattaagctcatctact
acaccttggctggattcagtaaacaaaccatttggcatgccaagttcagtgccttcaccc
aggcttgtctcggggtcattcagcattgccaatggcactaaacagttccatcgtgtggta
catgagccggaatcccgggaaagtgaccaagcatcgtatataagcagcaaatttcaagat
ttgggaatttctagcagtagcagtacaaaaggaagttcaacatctgttgaggacgctcct
tcatcgagtgaagtttctggatcaccatctgtttcacggtcttcagtgcttcctgactcc
gggtggaaacctcgtggagtgttggttgctcatctacaggaacatcgctctgctgtgaat
gatattgctgtttcaacggaccagagcttttttgttagtgcatctgatgattcaactgtg
agggtttgggactcaaggaagttagagaaggatatttcatttaggtctaaattgacttat
tccttggagagtagccgggcattgtgcataacaatgattcggggttctgcacaagttgtt
gttggtgcatgtgatggcagcattcacttgttttccgtggattacatttcccgaggccta
ggccatgttgttgagaagtattcaggtgttgctgatgtcaagaagaaggatgttggagaa
ggtgccgttcttagtcttgtcaactactctgctgatccgtcatcaagccacttggttatg
tacagcactcagaattatggtattcatctctgggacaccagggctaatactgattcatgg
acactgaaatcacttcctgaggagggttatatctctactttggaaactgatccttgtggt
aactggttcatatcaggatcgtctaggggtgtattgactttatgggatcttaggtttcgt
ataccggtcaacacatggcaatatcctcgtacatgccctatagaaaccatgtgtctctat
gttccacaaccaaatactcctttttcttctatggctaggcctcttgtatatgttgctgct
ggttgtaatgaagtgtctctttggaatgcagaaactggaagctgccatcaggtatttcga
gtaccaggtaatgatggtgatgctgagttttccgagttgccttgggcattagccagaccc
caaaacaaggcgaattctaaatcagatcctagacgaaatgtcaacctgaaataccgtgtt
gatgagttgaatgaaccacctcctcgtctgtctggtattcgttccttacttcctctgcct
ggtggagatttattaactggcggaaccgatttgaagatacgtagatgggaccatagcaga
cctgagcgcagttactgtgtgtgtgggccaacaattaagggcctgggaaatgatgaactc
tatgaaagcaaatctagctttggtgtgcaggtcgtgcaggaaatgagaaaacgaccaacc
actacgaaaatgagtacaaaagcagttcttgcagcagctgctactgatcctgcgggttgc
catcgtgactcggttctctccctcgcgtctgtcaaattgaaccagagattattgttatca
agcagtagagatggagcaattaaggtctggaaatga
DBGET
integrated database retrieval system
