Amaranthus tricolor (tampala): 130816003
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Entry
130816003 CDS
T09367
Name
(RefSeq) chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
atri03110
]
130816003
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP100
130816003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
nSTAND3
AAA_22
TniB
Mg_chelatase
AAA_18
IstB_IS21
NACHT
Zeta_toxin
AAA_28
NBD_SMAX1
AAA_25
UVR
AAA_3
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
130816003
NCBI-ProteinID:
XP_057538551
LinkDB
All DBs
Position
6:8873074..8882590
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AA seq
917 aa
AA seq
DB search
MNNIAVASPHLLKIPASINYQRRHGKFQGSERVITSSLKMVAPHDVSRLRIYAFSRLRVC
TPFLGSIGSLKAIGFDSKMKDAMLVYKGKARNAVVKAVFDRFTEKSIKVILLAQEEARRL
GQNAVGTEQILLGLAGEGTSIAAKVLKSAGVSLKKARIEVEKIVGKGSGFIPIEIPFSPR
AKHVLELSLDEARKLGQNYISAEHLFLALLSEGEGVAARVLDSLAVDTKEIREQVVIMMD
EKEPIAQTSGNSSDSMATLQEYGTNLTQKAKEGKLDPVIGREKQIERVIQILSRRTKNNP
CLIGDPGVGKTSIAEGLALLIASGDVPETIEGKQVITLDMSRLVSGTKYRGEFEGRLQKI
MEEVKESNNLILFIDEVHTLIGAGAAAGAIDAANILKPALARGELQCIGATTLDEYRLHI
EKDPALERRFQPVKVPEPTVDEAIQVLRGLRERYETYHKLSYTDETLVAAVELSSQYISD
RFLPDKAIDLIDEAGSRVRLCHAAHPEEVRELEKQVMQIAKEKDAAGRIQDFERAAELRD
QELDLKVQLSALISQNKELKEADMNDVGPVVTEADIREIVFSWTGIPVQKVSLDESKRLL
RMEDNLHGRVIGQDEAVKAISRAIRRARVGLKNPDRPIASFIFSGPTGVGKSELAKALAA
YYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIE
KAHPDVFNMMLQILEDGRLTDSKGRTVNFKNTLMVMTSNIGSNVIEKGGRVIGFDLTYNH
TNSSYNRIKSLVIEELKQYFRPEFLNRLDDMIVFRQLTKLEVKDIAEIMFKEVFKRLKTK
GIDIQVTERFKDKVVEDGYDPSYGARPLRRAIMRLLEDNMAEKMLAGEIHDGDSVILDAD
FSGNIIVLNNTSSSMFS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattgctgttgcgtcacctcatttgttaaagataccagcttccataaactat
caacgaagacatgggaaatttcaaggttccgaaagggttataacttcatcgctaaaaatg
gtagcacctcatgatgtatcgagattaagaatttatgctttttcgagattacgagtatgt
acaccttttttgggttctataggaagtcttaaagctatagggtttgattctaagatgaag
gatgcaatgttggtttacaaaggaaaagctaggaacgctgttgtgaaggctgtgtttgat
cgatttactgaaaaatcaatcaaagttatcctgcttgctcaggaggaagcaaggcgatta
ggtcaaaatgctgttggtacggagcaaattttgttgggacttgctggtgaaggaactagc
attgcggctaaggttttgaaatctgcaggcgttagcttgaaaaaagcacgtattgaggtt
gaaaagatagttggaaaaggcagtggttttattcctattgaaattccgtttagtcctcga
gcaaagcatgttttagagctgtcacttgatgaggctcgtaaacttggtcaaaattatatt
agtgcagaacacttatttttggcattgcttagtgaaggtgaaggtgtagctgcccgtgtc
cttgatagtctggctgttgatacaaaagagattcgcgagcaggttgtaatcatgatggat
gaaaaggagcctattgctcaaaccagtgggaactctagtgatagtatggccacattgcaa
gagtatggcacaaatttgacacagaaggcaaaagagggaaaattggatcctgttattgga
agggaaaagcaaatagaacgtgtcattcaaatactaagtcgtcgcacgaagaacaaccct
tgcctcatcggagatccgggtgttggcaaaacctctattgcggaaggactggcgctgtta
attgcttctggtgatgtcccggaaacaattgagggaaagcaggttataactcttgacatg
agccgtcttgtttctggaacaaaatatcgtggagagtttgagggtagactgcaaaagata
atggaagaagttaaagagtcaaataatttgattctatttattgatgaagtgcacacactg
attggagctggggctgcagcgggggcaattgatgctgcaaacatcttaaaaccggctctt
gcaaggggtgaattacagtgcattggggccacaacgcttgatgaatacagactacacatt
gagaaagacccagcattagagagaagatttcagccagttaaagtgcctgaacccacagta
gatgaagctattcaggtcctcagagggctccgtgaacgatatgagacttaccacaaactc
tcctatacagatgaaacattagttgcagcagtagaactgtcttcgcagtacatcagtgat
aggtttcttcctgataaagccattgatcttattgatgaagctggttctcgggtgcggttg
tgtcatgctgcgcatcctgaagaagtaagagagcttgagaaacaggtcatgcagattgca
aaagaaaaagatgctgctggtcgcattcaagactttgaaagggctgctgagttgcgagac
caagaactcgacctaaaggtacaactttctgcactcataagccaaaacaaggaactgaaa
gaggcagacatgaacgatgttggaccagttgtaacagaagcagacataagggaaatagtt
ttctcttggaccggtataccagttcagaaagtctcacttgatgaatcaaagcgtcttctc
agaatggaagataatctccatggacgagtaataggtcaagatgaagctgtcaaagccatc
agtcgtgcaattcgccgtgctcgtgttggcttaaagaatcctgaccgtcctatcgccagc
ttcattttctcgggtccaactggtgtaggaaagtcagaactcgcaaaagctttagctgct
tactactttggttccgaagaagccatggttcgccttgatatgagtgagttcatggagaga
catacggtttcgaagttaattggatctcccccaggctatgtcggttactccgagggtggc
cagcttactgaggctgtgaggcgacgcccttatacattggtactctttgatgaaattgaa
aaggctcatcctgatgtctttaatatgatgcttcagattctggaagatggaaggttaacc
gacagcaagggaagaactgtgaactttaagaacacccttatggttatgacctcaaacatc
ggaagcaatgtgattgagaagggtggtcgggttataggatttgatctgacatataatcat
acaaatagcagttataacagaataaagagcctagtgattgaagagcttaagcaatatttt
agacccgaatttttgaataggctagatgatatgattgtgtttaggcagctcacaaagttg
gaagtcaaggatattgccgagatcatgttcaaggaagttttcaagcgacttaaaactaag
ggcatcgacatacaagtaactgagcgattcaaagacaaagtagtggaggatggttatgat
ccgagttatggagcgaggcctttgagaagagctatcatgagacttttagaggataacatg
gctgagaagatgcttgcaggagaaatacatgatggtgattctgttattcttgatgctgat
tttagtggaaacatcattgtgctcaacaacactagttcaagcatgttttcctag
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